Wolbachia endosymbiont of Onchocerca ochengi: wOo_00290
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Entry
wOo_00290 CDS
T02212
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
woo
Wolbachia endosymbiont of Onchocerca ochengi
Brite
KEGG Orthology (KO) [BR:
woo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
woo03016
]
wOo_00290
Enzymes [BR:
woo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
wOo_00290
Transfer RNA biogenesis [BR:
woo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
wOo_00290
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF2251
Motif
Other DBs
NCBI-ProteinID:
CCF77905
UniProt:
I7JE80
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All DBs
Position
complement(20138..21337)
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AA seq
399 aa
AA seq
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MLISTMSDLNNICRELIAKKPKFIAVDTEFVRNNLTYYPKLSLIQISYKERSFVIDVLAP
EIDLSFVKKVMLDREIIKVFHSCRQDIESLFTVFKCIPAPIFDTQVAAMFCHYYYNFIGY
SKVVEQYQGIVLNKVKAKNSDWLKRPLSEDQLNYAVSDVVHLYDLHQILHDKLEEKNRMG
WFREEMESVVDINKYLQSPKDAWKRIKFNHGVNPRLTLTVKAVSEWQETLAQRYNTNRNK
IINNSIIAGFIERNVERVDEILENLKKNAKNVKEKDLLEFVDIFNENEKDFIQQNYTSLN
SHDRSVFDILSVILESKCKENNISRKLVSSKDELVGSISGQMDKLFKGWRYDFFGKSVES
FLNASSKFEISVVKFTNNITEIRSNLINTGCKLKSTAGI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctaattagcacaatgtcggatctgaataatatatgtagggagctaatagcgaaaaag
ccaaaatttatagctgttgacacagagttcgttagaaataacttaacctattatcctaaa
ttgtcattaattcaaatttcttataaggaaaggagttttgttatagatgtgttagcgcca
gagattgatttatcatttgttaagaaagtcatgcttgatcgagaaataattaaagtattt
cacagctgtcggcaagacatagaatctttatttactgtatttaagtgtatacctgctccc
atttttgatacccaagttgctgctatgttttgtcattattactataattttattggttac
tcaaaagtagtggaacaatatcagggaatagtgctgaataaggttaaagctaaaaattca
gactggttgaagcgtccattgtccgaagatcagttaaactatgcagtaagtgatgtagtt
catctatatgatctacatcaaatattgcacgataagcttgaagaaaagaatagaatgggc
tggtttcgagaagagatggaatcagtggttgatataaataagtatttgcaaagtccaaaa
gatgcatggaagagaattaagtttaatcatggagtaaatccgagattaacgttgactgtt
aaagcagttagtgaatggcaagagaccttagcacagcgctataatacgaatcgtaataaa
ataattaataattctataatagctgggtttattgagagaaacgtagagcgtgttgatgag
attttagaaaatctcaagaagaacgcaaaaaatgtaaaggagaaagatttgttagaattt
gtagatattttcaatgagaatgaaaaagattttatacaacaaaattatacttcgttaaac
agtcatgataggtctgtgtttgatatactttcagttattctagagagcaagtgtaaagaa
aataacatatcaagaaaattggtttcttcaaaggatgaattagttggttcgatatctgga
caaatggataaactatttaaagggtggaggtatgactttttcggtaagtcagttgaatca
tttttgaatgcaagctcaaagtttgaaatctcggtagtgaaatttacgaataatataact
gaaattcggagtaatttgataaatacaggttgtaagttgaagtcaactgctggaatttaa
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