Wolbachia endosymbiont of Onchocerca ochengi: wOo_01030
Help
Entry
wOo_01030 CDS
T02212
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
woo
Wolbachia endosymbiont of Onchocerca ochengi
Pathway
woo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
woo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
wOo_01030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
woo03400
]
wOo_01030
DNA repair and recombination proteins [BR:
woo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
wOo_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCF77953
LinkDB
All DBs
Position
complement(85491..88004)
Genome browser
AA seq
837 aa
AA seq
DB search
MSFIKEKNTPVMEQYLNLKARYRDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNLC
GQNIPMCGVPAHNSESYLHKLIDLGFKVAICDQLETANEAKRRGHKSIVKRDVVRIVTPG
TIIEDSLLEDKSNSYLASIVEENEEYAIGWLELSTGKFFYTITNLKALDNDLLRVSPKEL
LISEKLIEDKKIRSILKSYKISITQHAQSFFEYNKSYRTLCEFYKIRELGVIGNFSKVEV
IACGVLLEYVRVTQKGCIPRLELPKPYKQQSFMLIDASARRNLELFSTQFGERKGSLISV
IDHTVTASGGRLLKQMLASPLACSKAVNLRLSTVEFFVNHHELRKKVREILSSIPDIERS
LSRLVIGRGSPKDINLLKVGLGKTLELSEFLCKIESGKNEFLLRRYIIPVSNAEIKTQIS
ASNSRMTVKPGEDELSAIHKSLGNHKELFELLNDAVLDNDLNSIKEGGFINPQYNRELSE
LSYVLNNVNKLITKLRKSYCDLTGIASLKIVHNNILGYYVEVSTSHKLTSNIFIHRQSLA
NSIRYTTSELKELENKIFAARDAIINLEIKIFGELCSKIAKESEKIALAANALAKLDVRT
SFAEIAVQNNYVKPIIDDSKEFNIYNGRHPVVEIDGKFIANSINLVGMHLITGPNMAGKS
TFLRQNALIAILAHMGSFVPADSAHIGVVDKIFSRVGATDNVTAGYSTFMVEMLETATIV
NQATERSLVILDEIGRGTGVYDGLSIAQAVIEHIHDVNKCRAIFATHYHELTKVGKYLKN
IKCFCVKVKEWNGKVVFLHEVVEGIADESYGIYVARLAGFPDSVLDRASAVFKELKA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcataaaagaaaaaaacactcctgtgatggaacaatatttgaacttgaaggct
cgatatagagatcatttgttgttttataggctaggagatttttatgaattgttttttgat
gatgctatcaaagctgcaaagctactaaatatagtacttactaaaagaggtaatttgtgt
ggacagaatataccaatgtgtggagtcccggcacataatagtgaatcttacctgcataaa
ctaatagatttagggtttaaagtagcaatctgtgatcagttagagactgctaatgaagca
aaaagaaggggccataaatctatagtaaaacgtgacgtagtcagaattgtcactccaggt
acaattatcgaagattcattattggaagataaaagcaatagttaccttgcgtctatagtt
gaagaaaatgaagagtatgctattggttggcttgaattatcaacaggaaagtttttttac
actataacgaatttgaaagctttagataatgacttgctacgtgtatcaccaaaggaatta
ttaatttctgaaaagctcattgaagataagaaaatcaggtcaattttaaaaagctataaa
atatcaattacacaacatgctcagagtttttttgagtataacaaatcctatagaacgttg
tgcgaattttataagattagagaacttggggtcataggaaattttagcaaagtggaggtt
atagcctgcggtgtgctgcttgaatatgtgagagtaactcaaaaaggttgtattccaagg
cttgaactgccaaaaccatacaagcaacaaagttttatgctcatcgatgcttcagcaagg
agaaatcttgaattattttcaactcagtttggtgaaagaaaaggttcactaatttcagtt
attgatcacacagttacagcttctggtggacgtttgcttaaacaaatgctcgcatcacca
cttgcttgctctaaagcggttaatttaaggcttagcactgttgagttttttgtaaatcac
cacgagttgcgtaaaaaggtgcgagaaatactttctagtattccagatattgagaggtcg
ttgtcgcgtttggtgatagggcgtggttcaccaaaagatattaatttattgaaagtgggt
cttggaaaaacgttagagttgtctgagttcttatgtaaaattgaatccggcaagaatgaa
tttctcttgcgacgatatattatcccagtgtcaaacgctgagattaagacacagatttca
gcatcaaactctagaatgacagtaaaaccaggtgaagatgaactgagtgcaatacataaa
agccttggcaatcataaagaattatttgagcttctaaacgatgctgtgcttgataatgac
ttaaattcgataaaagaaggtgggtttattaatccacagtataatcgagaattatcagag
ttatcctatgtgctcaataatgttaataaactgataactaagcttcgtaaatcttattgc
gatctgactggtattgcctcactaaaaatagtgcacaataatatacttggttattatgtc
gaagtgtcaacgagtcataagttaacttcgaatatatttattcataggcagagtttagcg
aatagcatacgctatactactagtgaattgaaggaattggaaaataaaatttttgcagcg
cgtgacgctataattaacttggaaataaaaatttttggtgaactatgcagtaaaatcgct
aaagaatctgagaagattgctcttgccgcaaatgctttagctaaactggatgttaggact
tcatttgcagagatcgcagtacaaaataattacgtaaaacccattattgacgatagtaaa
gaattcaacatctataatggaagacatccagtagttgaaattgatggtaaatttattgca
aatagtattaatttagttggtatgcatctaatcactggtcccaatatggctgggaaaagt
actttcttgaggcaaaatgctctcattgcaattctagctcatatgggttcatttgtacca
gcagatagtgcgcacattggagtagttgacaagatattcagcagagttggtgcgacagat
aatgtaacggctggctattccacctttatggtagagatgcttgaaacagcaactatagtc
aatcaggcaacagaacgttccttagtgatacttgatgaaattggcagaggtacaggagta
tatgatggattatctatcgctcaggcggtgattgaacatattcatgatgtaaataagtgc
cgcgctatttttgcaactcattatcatgaactaactaaagtaggtaaatatttaaaaaat
ataaaatgtttctgtgtaaaagtaaaagaatggaacggaaaagtcgtctttttacatgaa
gtagttgagggtattgcagatgagtcatatggaatatatgtagcaagacttgctggtttt
cctgattctgtgctggacagagcaagtgcagtatttaaggagctaaaggcctga
DBGET
integrated database retrieval system
