Wolbachia endosymbiont of Onchocerca ochengi: wOo_02480
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Entry
wOo_02480 CDS
T02212
Name
(GenBank) superfamily I DNA RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
woo
Wolbachia endosymbiont of Onchocerca ochengi
Pathway
woo03420
Nucleotide excision repair
woo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
woo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
wOo_02480
03430 Mismatch repair
wOo_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
woo03400
]
wOo_02480
Enzymes [BR:
woo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
wOo_02480
DNA repair and recombination proteins [BR:
woo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
wOo_02480
MMR (mismatch excision repair)
Other MMR factors
wOo_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCF78030
UniProt:
I7JEE6
LinkDB
All DBs
Position
complement(217153..219069)
Genome browser
AA seq
638 aa
AA seq
DB search
MGDYLSLLNPEQRLAVTNVDGPILILAGAGTGKTRTITSRIAHIIRNGYASSNGILAVTF
TNKAANEMVSRVLELTGVNIPWLGTFHAIAAKILRRHAEIVGLNSNFTIIGMDDQLQVIK
NIINEINPDYFLEKCKTVMSVIQQWKEKCLLPSEVGSIQSLRPLYVTALKVYNQYQERLK
FLNSVDFGDLLLYNIQLFDQEAETLSYYQNKFKYIVVDEYQDTNVIQYLWLKYLAKGHSN
ICCVGDDDQSIYSWRGAEVENILKFSNDFKNAKTVKLECNYRSTSHILATASYIINHNKT
RLEKKLWTTNTEGEKVNLIKLWDGKAEARFISEQILKLNKYRFSDIAVLVRAIFQTRILE
EYFIKYSIPYKIISGVKFYERHEIRDIIAYLRLVVNINDDLAFERIVNRPKRSIGTTTLK
KIYTIAQDNKTSFFGAARVLVDSNQVIGRIKLSLNDFLSKIEAWKKIVSVKPLHKFVKIV
ADQSGYMEMLENEEVIGLTRIENVKELISSLKNFDNITTFLEHVSLVTEVDNMSGDDTVY
VMTLHAAKGLEFPCVFLPGWEEGLFPHQRSFEDKSGRALEEERRLAYVGITRAKERLIIS
CAGRREMNNQWQSMYTSRFIKELPRENIEIIKSNIAYC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattatctctcactgctgaatccagaacaacgattagctgtaactaatgtagat
gggccaattttgatattggcgggagctgggacaggaaaaacgagaaccattacttcaaga
atagcacatataattagaaatggttacgctagttctaatgggatattagcggttacattt
actaacaaagctgcaaatgaaatggtatcgagagtgcttgagcttacaggtgtaaatata
ccatggcttggtacctttcatgctattgcagcaaaaattttgcgccgtcatgctgaaatt
gtgggtttaaactctaatttcacaattattggtatggatgatcaattacaggtaataaaa
aatattattaatgaaataaaccccgactacttcttagagaaatgtaagaccgtcatgagt
gttattcagcaatggaaagaaaagtgcttgttgccgtctgaagtggggagcattcaatca
cttagacctttatatgtaactgcacttaaagtttataaccaatatcaagaaaggttgaag
ttccttaactctgttgattttggtgatctattattgtacaacatacaactttttgatcaa
gaggctgaaactctatcctactaccaaaacaagttcaaatatattgtggtagatgagtat
caagatacaaatgtaatacaatatctttggctgaaatatttagcaaaaggacattcgaat
atttgttgtgtaggagatgacgatcagtcaatatacagttggcgtggtgcagaagttgaa
aatattttgaaattttctaacgattttaaaaatgcaaaaaccgttaaattggagtgtaac
tacagatcgacatcccacatacttgcgactgcgtcatatattattaatcataacaaaacc
cgcttagaaaaaaaattatggacaacaaatactgaaggggaaaaggtaaatctaataaaa
ttatgggatggcaaggctgaagcaaggttcataagtgaacagatattaaaactcaacaaa
tatagatttagtgacattgcggtcctggtaagagctatttttcaaactagaatcctggaa
gaatattttataaagtattcaattccctataagattataagcggtgtaaaattctatgaa
cgtcacgaaatcagagatataattgcatatttaagactcgttgtgaacatcaatgatgac
ttggcttttgaaaggattgtaaatcggccaaagcggagtataggaactacaactctaaaa
aagatatatacaattgctcaagataacaagacttctttttttggggcagcaagagtacta
gtcgatagcaatcaagtaattggaaggattaagctctcactcaatgattttttaagtaaa
attgaagcttggaaaaagatagtaagcgtaaagccattgcataaatttgttaaaatcgta
gcagatcaatcagggtatatggaaatgcttgaaaatgaggaagtgataggtttaactcgg
atagaaaacgttaaagaacttatttcatctttaaaaaactttgataatatcacaactttc
ttggagcatgtaagtttggtgacggaagtcgataatatgagtggtgatgacactgtatat
gttatgactcttcatgcagctaaaggacttgagtttccatgcgtgtttttacctggctgg
gaagaaggattatttccgcatcaaagatcctttgaagataaaagtggtagagctttagag
gaagaaagaagacttgcatatgtcggaataactagagcaaaagaaaggttaattatttca
tgtgcaggtagaagggaaatgaataaccagtggcaatcaatgtatacttcgcgatttatc
aaggaactaccaagggagaatattgagataattaagagtaacattgcttactgctaa
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