Wolbachia endosymbiont of Onchocerca ochengi: wOo_04730
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Entry
wOo_04730 CDS
T02212
Name
(GenBank) excinuclease ATPase subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
woo
Wolbachia endosymbiont of Onchocerca ochengi
Pathway
woo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
woo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
wOo_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
woo03400
]
wOo_04730
DNA repair and recombination proteins [BR:
woo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
wOo_04730
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
wOo_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
nSTAND3
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
BsuBI_PstI_RE_N
AAA_23
DUF5300
Motif
Other DBs
NCBI-ProteinID:
CCF78151
UniProt:
I7ITQ6
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All DBs
Position
403260..406085
Genome browser
AA seq
941 aa
AA seq
DB search
MESFIRVKGAREHNLQSIDVDIPKNNLVVITGLSGSGKSSLAFDTIYAEGQRRYIESLST
YARQFLNVKDKPDVESITGLSPTISIDQKSISKNPRSTVGTVTEIYDYLRLIYSRIGVPY
SPVTGLPIRKQTMSQIVDTIVALPLETEVYILAPIVRGRKGEHLKEILEIKRQGYVRLKI
DGKIYDINNLPKLDKGRRHDIFVVTDKILISDDIGNRLPSSIESALRLGHGLMYAEIIGL
PNNHNSNYKSGHILTFSESFACPESGFTLEEIEPRFFSFNSPYGACGSCNGLGKKLSIDV
KLIVPDETLSISEGALKPVGSVFNQMHINYGFIKNAILSLAENFKFSLDLPWKDIDQKVK
DMVLFGSREMKFQGLVNILENQIDYDKTLIERYCSVTYCKECNGYRLREEALTVKIDEKH
IGEISKLDIDESLKWFGDLPNKLTEQQKQISIRILNEIVKRLTFLKNVGLSYLTLDRESS
TLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNYRLIATLKSLRDIGNTVIVVE
HDEDTIMAADYVIDLGSGAGVNGGRIVAEGTPGQVRKSLESVTGQYLSRKKRILIPKKRR
KQTTQFIKVINACENNLKNVSVKFPIGNFICVTGISGGGKSSLVVEILYKYSAYKIYRSS
VKYGKCDKIEGLEYIDKVIEVDQSPIGKIPASNPATYVGIFTHIRNWFAGLPESKARGYS
IGRFSFNIKGGRCEACKGDGYLKIEMHFLPDVYVKCEQCKGQRYNRETLEITYKGKSISD
VLDMTIDQACDFFGNLPMIKEKLVSLQEIGLGYVKLGQPSTTLSGGEAQRIKLSKELSKR
FTGKTLYILDEPTTGLHFEDVNNLLKVLHKLVDLENTVIVIEHNLHVIKTADYIVDIGPE
GGIKGGKVVATGTPESIIDIPESITGRYLKPYLLNGIKSSQ
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttcatcagagttaagggtgcgagagaacataatctacaaagtatagatgtt
gatataccaaaaaataatctagttgttataactgggctaagtggttctggtaaatccagc
cttgcatttgacacaatttatgcagagggtcaacgtcgctacattgaaagcctatcaacc
tacgcacgtcaatttcttaacgtaaaagataaaccagatgttgagtcgattacaggcctc
tctccaacaatatccattgatcagaaatcgatctcaaagaatccaagatcgacagttggg
accgttactgaaatttatgactatctgcgcttaatatattccagaataggagttccttac
tcacctgtaactggattaccgataagaaaacagactatgtctcaaattgtagatactata
gtggcgctacctttggaaactgaagtatatatacttgctcccattgtacgtggtagaaag
ggggaacatcttaaagagatattggaaattaaaaggcaaggttatgtaagactaaaaata
gatggcaaaatatatgatataaataacttaccaaagcttgacaagggcagaagacatgat
atctttgtggttacagataagatattaatatcagatgatataggaaatcgattgccaagc
agtatagagtcagcattgaggcttggtcacgggttaatgtatgcagaaataataggcttg
cctaacaatcataattccaattataaaagtggtcatatcctaaccttttctgagagtttt
gcatgtccggaatccggctttactcttgaagaaatagaaccaagattcttttcttttaac
agtccttatggtgcatgtggatcatgtaatgggcttggtaaaaaactaagtattgatgta
aagctaatagtgccggatgaaacactttcaatatctgaaggcgctttaaaaccagtaggg
tcagtattcaatcaaatgcacataaattatgggtttataaaaaatgcaatactatcattg
gctgaaaattttaaatttagtcttgatcttccatggaaggatatagatcaaaaagtaaaa
gatatggtactttttggttctagagaaatgaaatttcaaggtttggtcaatatcttggaa
aatcaaatagattatgataaaacacttattgagcgatattgttctgttacttactgtaaa
gaatgtaatggctacagattaagagaagaagcacttacagtaaaaattgatgaaaaacac
ataggtgaaatatctaaactcgatattgatgaatctcttaaatggtttggagatttgcca
aataaacttacggaacaacagaagcaaatctcaattagaatactaaatgaaatagttaag
agattgacatttttaaagaatgtaggattgagttatcttacacttgatcgtgagtccagc
actctctctggtggtgagagccaaagaattaggcttgcttcacaaataggttctggttta
acaggtgtgctgtatgtgcttgatgaaccttcgataggtcttcatcagtgtgataattat
cgattaattgccacactcaaaagcttgagagatataggcaatactgtgattgttgttgag
catgatgaagatacaataatggctgctgattatgtaatcgatcttggttctggagctggt
gtaaatggaggaagaattgttgcagagggaacaccaggtcaggtgcgaaaaagcttagaa
agcgtaacaggacaatatttaagcagaaagaaacggattttgattccgaagaagaggaga
aaacaaacaactcagttcataaaggtaattaatgcgtgtgagaataatttaaagaatgta
agcgttaagtttcctatagggaattttatttgtgttactgggatatcagggggaggaaaa
tcaagtttagttgtagaaatactatataaatactcagcatataaaatatatcgttcatct
gtaaagtatggtaagtgtgataaaatagaaggccttgagtatatagataaagttatagaa
gtcgatcaatcaccaatcggtaagattcctgcatcaaatccagcaacatatgtaggtatt
tttactcatataaggaattggtttgcaggtcttccagaatcaaaagcacgaggttacagt
ataggccgattttcatttaatattaagggaggaaggtgcgaagcgtgtaaaggtgatgga
tatttaaagatagaaatgcattttctaccggatgtttatgtaaagtgtgagcaatgtaaa
ggtcaacggtataaccgggaaacattagagattacctataaaggtaaatcaatttctgat
gtgcttgatatgacgatagatcaagcttgtgatttttttggaaatcttccaatgataaaa
gaaaagttagtttctttgcaggaaatagggcttggctatgtaaaactcgggcaaccatca
acaacgttgtctgggggagaagcacagcgaataaaactatctaaagagctctcaaaacga
tttactggtaagacattatatattctcgatgagccaacaactggattgcactttgaagat
gtaaataacttattaaaagtgcttcataaattagtcgatttagaaaacactgttatagtt
atagagcataatttgcacgttataaaaactgcagattatatagtagatatcggaccagaa
ggcggaataaaaggtggaaaagtggttgctacaggcactccggaaagtataatagatata
ccagagagtattacaggtagatatcttaagccatacttactcaacggtataaaatcatca
caataa
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