Wolbachia endosymbiont of Onchocerca ochengi: wOo_09170
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Entry
wOo_09170 CDS
T02212
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
woo
Wolbachia endosymbiont of Onchocerca ochengi
Pathway
woo03030
DNA replication
woo03430
Mismatch repair
woo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
woo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
wOo_09170
03430 Mismatch repair
wOo_09170
03440 Homologous recombination
wOo_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
woo03032
]
wOo_09170
03400 DNA repair and recombination proteins [BR:
woo03400
]
wOo_09170
Enzymes [BR:
woo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
wOo_09170
DNA replication proteins [BR:
woo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
wOo_09170
DNA repair and recombination proteins [BR:
woo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
wOo_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CCF78431
UniProt:
I7IU31
LinkDB
All DBs
Position
complement(828018..831353)
Genome browser
AA seq
1111 aa
AA seq
DB search
MFIHLRVHSVYSLLESSVKIEELIGLCLQYRMPAVAVTDSGNLFGSLEFAEYAASRGIQL
IIGCNIIVRQSEQNLPILLLAKNEQGYTNLVTLVSDSFRKRKNSHDIPYADFTELLSLSS
GLIALTGGSDGILAQLLLKQDRETVKRLFSAFNGHLYVELQRHRLNEKLELEEVLIDFAY
QHNVPLVATNDVFFLNKSDYEAYDILTCISEVSYSFEKNREKPTTEHYFKSVIEMKELFS
DIPEAIHNTLVIARRCSYMPRSRQPILPKFPCRENKTENEELREQAITGLELRIANEIDI
NIEQYYDRLNYELSVITSMNYSGYFLIVSDFIRWSKANGIPVGPGRGSGAGSIVAWALQI
TDLDPTKFGLIFERFLNPDRISMPDFDIDFCQEKRDLVIDYVRKKYGHVAQIITFGKLQA
RAVLRDVGRVLQMPYAQVDKISKMVPFNPVNPVTLSQAIELDQNLQKERDSDEVIAKLLD
VSLKLEGIYRHVSTHAAGIVICDQKLENFVPVYYDPNSTLPITQYSMKYVEKAGLIKFDF
LGLSTLTLIDHVCRLINRNGEKINISSISLNDYRTYKMLSKGDTIGVFQLESSGMREVLI
KLKPDCIEDIIALISLYRPGPMDNIPTYIARKHGLEKPDYIHPLLEEVLKETFGVIIYQE
QVMEIARILSGYSLAEADLLRRAMGKKIKEEMDKQRELFIQGAMKNAVDYDRASYIFDLV
AKFAGYGFNKSHAAAYAVISYQTAYLKANYPLEFFTALMNLNISNRDKLNLFYHAAKLCG
IAVLPPDVNKSQALFSIEGEYIRYGIAALRNVGSSIAEVIVHTNSSTYWNIWEFIQNSGH
IINKRALESLIKAGAFDSVHQNRRQLYESIDTLIYFANKNRQHKESNQAGLFDNLDVLKP
KLKDVKDFNKEEKLEHELFSLGFYLTDHPLKRFRTILKKLNIGFIGEGRTTKTAGVVLNV
RMRTSKRGRFVILTLSDPYNVSEIAFYKNEVIEEKRSLFSPGTFVIIDLETSENITRLAG
KDISEFTDRITSVIKRLILTGHANSQKIAMELNSVLKSGGRTKIMLKLFFEKYKVNILLP
DTYSITPQIAYEISNLSWVKSIEIDTNSLPI
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacacttgcgtgttcacagtgtttattcattgcttgagagttcagtcaaaatt
gaggaactgatcggcctttgcttgcaatatagaatgccagcagttgcggttactgattca
ggtaacttatttggctcacttgagtttgcagaatatgcagcaagtagggggatacagcta
ataataggatgcaatattatagttcgacaatcagaacaaaatttacccatattattactt
gcaaaaaatgagcaaggatataccaatttggttactttagtaagtgattcttttagaaag
cgcaaaaacagccacgatattccttatgccgattttactgagttattaagtttaagttca
ggtctgatcgctttaactggtggatctgatggaatattagctcaattattattgaagcag
gatagggaaacagtaaaaagactgttctcagcattcaatggtcatttatatgttgaattg
cagcgtcataggcttaatgaaaaattagaacttgaagaagtcttaatagactttgcttat
cagcacaatgtaccacttgttgcaactaacgacgtattttttttaaataaatctgactat
gaagcttatgatatattaacgtgcatatcagaggtaagttattctttcgaaaagaatagg
gaaaaaccaactactgagcattattttaagtctgtgatagaaatgaaggagctatttagt
gatattcctgaagcaattcataacactttagtgatagctaggcgatgctcttacatgcca
agaagtaggcagcctattttgcctaaatttccttgtcgagagaataaaactgaaaatgaa
gaactgagggaacaagcaattacaggtttagaattacgcattgcaaatgaaatagacata
aacattgagcagtactatgatcgcctgaactacgaactgagcgtgataacctcaatgaat
tattctggatattttctcatagtttctgattttattcgttggagcaaggcaaatggcatc
ccagttggtccaggaagaggttctggcgctggatcaattgttgcttgggcgttacagatc
acagacctcgatccaacaaaatttggtctgatttttgaaagatttttaaaccctgatcgt
atatcgatgcctgactttgatatcgatttttgtcaagaaaagagagacttagttattgat
tatgtacgaaagaagtacggtcatgtcgctcaaataatcaccttcgggaaattgcaggca
agggccgtactacgagacgttgggagggtgttacagatgccttatgctcaagtggataaa
atatctaaaatggttccgtttaatccagtaaaccctgtgactctgtcacaagcaatagag
cttgatcagaatctgcaaaaagagcgagatagtgatgaagtgattgcaaaacttcttgat
gtttctcttaagcttgagggaatatatcgtcacgtttcaactcatgctgctggaattgtg
atatgcgaccaaaaattagaaaactttgttcctgtttattacgatccaaattctactttg
ccaatcactcagtacagcatgaaatatgtggaaaaagctgggctaataaagtttgatttc
ctcggacttagcacattaacactaatagatcatgtatgccgtttaattaatcgtaatggg
gaaaaaatcaatatttcttcaatttcattaaatgattacagaacttacaaaatgctctca
aaaggtgatacaatcggggtgttccagcttgaaagttctggaatgagagaggttctaatc
aagttaaaaccagactgcattgaagatattatcgctttaatttccctttatcgtccagga
cctatggataacattccaacttacattgcaagaaaacacggacttgaaaaaccagactat
attcaccctttactcgaagaagtattaaaagaaacgtttggagtaataatttaccaagag
caagtaatggaaatagcacgtattctctccggatatagtttagctgaagcagatctatta
aggcgtgctatgggtaagaaaatcaaagaagagatggataagcaacgtgaactttttatc
caaggagcaatgaaaaatgctgttgattatgacagagcaagttatatttttgatcttgtt
gcaaaatttgctggttacggatttaataaatctcatgcagctgcatatgcagtgatatct
taccaaacggcttacctcaaggccaactatccattagaatttttcacagctttgatgaat
ttgaatattagcaacagagataagctgaacttgttttatcatgctgcaaaactttgtggg
attgctgttcttccacctgacgtaaataagtctcaagctctattttcaatagagggcgaa
tatatacgctatggtattgcagctttgcgtaatgttggttcttctatagcagaggtaata
gtgcacacaaattcgagcacttattggaatatatgggaattcattcaaaattcgggacat
ataataaataaaagagcactagagagcctaattaaggccggagcatttgatagtgtgcat
caaaacagaaggcagctatatgagtcaatagacacattgatttactttgcaaataaaaac
agacaacataaggagtcaaatcaagctggtttgtttgataatcttgatgtcctaaaaccg
aaacttaaagatgtgaaagatttcaataaagaagaaaaactagagcacgagttattttca
ctgggattttacttaactgatcatccacttaaaagatttagaactattttgaaaaaatta
aacattggatttattggagagggtagaacgacaaaaactgctggtgtagtattaaatgta
cgtatgagaacctcaaagcgtggaagatttgttatacttacgctctctgacccatataat
gtttctgaaatagcattttacaaaaatgaagtaatagaagagaaaagaagtctattttcg
ccaggaacatttgttataattgatcttgaaacttcagaaaatataacaagattagcagga
aaggatatatctgaatttacagatagaatcacttctgtaataaaaagactaatcttaact
ggacatgcaaattcgcaaaaaattgctatggaactaaattcagtgttaaaaagtggtggc
aggaccaagataatgttgaaactcttttttgaaaaatataaggtaaacatcttgttaccg
gatacatattcaattacccctcagattgcttatgaaatatctaatttaagttgggttaaa
agtatagagattgatacaaatagcttgcctatataa
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