Weissella paramesenteroides: CO680_00765
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Entry
CO680_00765 CDS
T05120
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO680_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_00765
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO680_00765
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO680_00765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
AAA_16
nSTAND1
AAA_23
AAA_22
nSTAND3
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
cobW
AAA_14
NACHT
SLFN-g3_helicase
Aq_aa27
Septin
MMR_HSR1
FtsK_SpoIIIE
DUF87
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ATF40673
LinkDB
All DBs
Position
142180..145035
Genome browser
AA seq
951 aa
AA seq
DB search
MVNDWIKIHGARAHNLKNVDVDIPRDKFVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYYRLLFARVGKP
DPAADGTIVKKSIDQMLNDLSERLPEGSRLQILAPIIRHKRGSHATAFERIQKEGFVRFI
VDGEMHEVTDDIDLNKNKYHDIAIVVDRIILRESSRARLFESFESAMRLAEGLVTVDVVR
GEEQQLTYSDHYTGPLKNFAVGKLEPQLFSFNAPLGACPVCGGLGITLEVDIDRVVPDQS
KTLAEGAIDAWNPISSSYYPEMLRQFADSRNIPMDVPFEELTDEQRELILYGSGEKTFHF
HYENDFGGVRDVDVVFEGVMNNINRRYRESNSDFTREQMRSYMDELPCQACHGYRLNEGA
LSVKIGGQNIGQISEQSVDHELSFFEQLSFGQQDQEVAAPIVKEIKDRLRFLKNVGLEYL
TLSRSARTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIHSLHQMRDLG
NTLIVVEHDEDTMRAADYIIDVGPGAGEHGGEIMATGTPVEIEENPQSLTGQYLAGKKFI
PVPETRRPGNGQKITISGAAENNLKNIKVDFPLGKFTVVTGVSGSGKSTLVNTILKRALK
MELNHNSEKPGKYRKITGYENIDKIVDIDQSPIGRTPRSNPATYTGVFDDIRELFAQTNE
AKMRGYKKGRFSFNTKGGRCEACKGDGVIKIEMNFLPDVYVTCEVCGGTRYNSETLEVTY
RGLTIADVLNLTAEQAVDFFAAIPKIHRKLQTMVDVGLGYVKLGQSATTLSGGEAQRMKL
ASELQRRSTGKTFYILDEPTTGLHVADISRLLEVLQRLVDGGNSVLIIEHNLDVIKTADW
LIDMGPEGGEGGGNVLVTGTPEKIAATPTSYTGQYLGPIMVRDRQRAKEIN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgattggattaaaattcatggcgcacgcgctcataatttaaaaaatgtagat
gtggatatcccaagagataagtttgttgtcatgacaggattatcaggttctggaaagagt
tcgttagcatttgacacgttgtatgctgaggggcaaagacggtatgttgaaagcctatcg
gcgtatgcacgtcaatttttgggacaaatggacaaaccagatgttgatgcaattgatgga
ttaagtccggctatctcaattgatcaaaaaacgacatcaaaaaatccgcgatcaacggta
ggaaccgttacggaaattaatgattactatcgtttactatttgcacgtgtcggcaaacca
gatcctgcggcagatggtacgattgttaaaaagtcgatcgatcagatgttaaatgatctt
tcagaacgattgcctgaagggagtcgattacaaatattggcgccaattattcgccataaa
cgtggttcacatgccactgcttttgaaagaattcaaaaggaggggtttgttcgatttatt
gttgacggtgaaatgcatgaggtgactgatgatattgatttaaataagaataaatatcat
gatattgcgattgttgtcgatcgaattatcctccgtgagagttcacgggcacgacttttt
gaatcctttgaatctgcaatgcggctagcggaaggtttggtaacagtggatgttgttaga
ggagaagaacaacagttgacgtattcagaccactacactggacccttaaaaaactttgca
gtgggtaaacttgaaccacagctattttcattcaatgcgcctttgggagcttgtccagta
tgtggtggcttaggtatcacattggaagttgatattgatcgcgttgtgcctgatcagagt
aagactttagctgaaggagcaattgacgcttggaacccaatttcttcatcatattatcct
gaaatgcttcgtcaatttgccgattcaaggaacattccaatggatgtaccttttgaagag
ttaacggatgaacagcgtgaacttattttatatggatcaggagaaaaaacatttcatttc
cattatgaaaatgattttggtggtgtgcgtgacgttgacgttgtctttgaaggtgtgatg
aataacattaaccggcgttatcgtgaatcaaattctgattttacacgtgagcaaatgcgt
agctatatggatgaattaccatgtcaagcatgtcatggctatcggttaaatgagggcgca
ttgtctgtgaaaattggtggtcaaaatattggtcagatttctgaacaatcagtagaccat
gaactatcattttttgaacaattgtcatttgggcaacaggatcaagaagttgcagcacca
attgttaaggagattaaagatcgattacgtttcttgaaaaacgttgggctagaatatttg
acgttgtcacgttcggctcgaactttgtcaggtggtgaagcacaacgaattcgtttagca
acacaaatcggatcaaatttgtctggtgttatgtatgttcttgatgaaccatcaattgga
ttacatcagcgcgataatgatcgcttgattcattcgttgcatcaaatgcgtgacttaggc
aatacattgattgtggtcgaacatgatgaagataccatgcgtgcagctgattacattatt
gacgtgggacctggtgctggtgaacatggtggtgaaattatggctaccgggacaccggtt
gaaattgaagaaaatccacagtcgttaacgggacagtaccttgctgggaaaaaatttatt
ccagtgccagaaacacgtcgtccaggtaatggacagaagattacgatttcaggagctgcc
gaaaacaatctaaaaaatattaaagttgatttcccattaggtaagtttaccgtagtgact
ggggtatcaggatcaggtaagtcaaccttagttaatacgatccttaaacgggcgttgaaa
atggaacttaatcataattcggagaaacctggtaagtaccgtaaaataacgggttatgaa
aatattgataaaattgttgatattgaccagagcccaattggtcgtacaccacgctcaaat
ccagcgacctacacaggggtctttgacgacattcgagaactatttgctcagacaaacgaa
gccaaaatgcgcggatacaagaaaggacgcttttcatttaatacgaaaggtggtcggtgt
gaagcatgtaaaggcgatggcgttattaaaattgaaatgaactttttgccagatgtatat
gtgacttgtgaagtttgtggtggtacccgttataattctgaaactcttgaagtgacttat
cgtggcttaacaattgcggatgtattgaacttaactgcggagcaagcggtcgactttttc
gctgctattccaaaaattcaccgtaagttgcaaacaatggttgatgtgggtctaggatat
gtgaagttgggtcaatccgcaacaaccttgtcaggtggtgaggcacaacgaatgaagttg
gcatctgaattgcaacgtcgatcaacagggaaaacattctatatactagatgagccaaca
acaggtttgcacgtggcagatatttctaggttgttagaggttctgcaacggcttgttgat
ggtggtaattcagtcttgattattgaacataatttagatgtcatcaaaacagctgattgg
ttgattgatatgggtcccgaaggtggtgaaggcggtggtaatgtcttggtaacaggaacg
ccagaaaaaattgctgcaactccaacttcatacactggacaatatttagggccaattatg
gttcgagatcggcaacgagcaaaagaaataaattag
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