Weissella paramesenteroides: CO680_01920
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Entry
CO680_01920 CDS
T05120
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CO680_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_01920
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO680_01920
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO680_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
PIF1
Cas3-like_C_2
nSTAND_NTPase5
UvrD-helicase
AAA_30
AAA_19
Zn_ribbon_FGT1_1
SLFN-g3_helicase
DAP3
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ATF40876
LinkDB
All DBs
Position
364730..367150
Genome browser
AA seq
806 aa
AA seq
DB search
MYAQVIVDVPTMQTNQPYTYHIPSLFSEALIRGMRVVVPFGKGNRLVQGFVTDISDTTDQ
PDKLKDISQIVELEPVLNDELLQLATWVADYNFAFRISVFQTMLPNVMRARYSKVLRLIE
PNELNHLPQIQALFADRDEVPFDVDNVDMTLVPTLLKLQKKRIIEIGYVVNNRAKVKKIN
AFKPIKSVDFYQEQRQQLRPSAVKQARLLSYLMQSPQTFVPVKEVIKSYQLDYAVLKQAE
GKGWIVQKPLESYRIPKLSTPVKNSQPLTLNAEQQEAYIAIANNISENDTKTFLLEGVTG
SGKTEIYLQAIAKALSEGQTALMLVPEITLTPQMVRRVKSRFGDDVAVMHSGLSDGERYD
EWRRIQRSEVHVVVGARSAVFAPLKNIGLIIIDEEHESSYKQDENPRYHARDVAQWRANF
HHATLVLGSATPSLESRARAQKNVYHLLTLEHRATNGMLPETQVVDMREAIKHGGDDIFS
PQLIEAIQNRLTKQEQIVLMLNRRGYANFLVCRECGFTPRCINCDVALTVHKDISRLVCH
YCGYSETIPTKCKNCGSTRIRQFGSGTQKVAEQLSEQIPQARVIRMDVDTTRRKGSTDQL
LTAFGNHEADILLGTQMIAKGLDFANVTLVGVLNADTTLSLPDFRASERTFQLLTQVSGR
AGRGDKPGKVIMQTFNPDHYAIQLARQQDYEAFYHQEMALRHAWKYTPYYFTIQIKFAHE
KIDESAKAAYEIANWLKNIIDNETIMLGPATGTIPRIKNKYYYRLVIKYRHDEKLIQALG
SLIKKGQQLQKQGITIIIDREPINFM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcacaagtaatcgttgatgtaccgacaatgcaaacgaatcaaccctatacctat
catattcctagtctcttttctgaagcacttattcggggtatgcgcgttgtggttcctttc
ggtaaaggtaaccgattggttcaggggtttgtaacagatattagtgacacaacagatcaa
cctgacaaactgaaagatatttcgcagattgttgaattagagccagttttgaatgatgaa
cttttacaactagcaacatgggtagcggattataattttgcttttcgaattagtgttttt
caaacaatgttacccaacgtcatgcgtgcaaggtacagtaaggtcttacggcttattgaa
ccaaatgaactcaatcatttgccacaaatacaagcgctatttgctgatcgtgatgaagtg
ccctttgatgttgataatgttgatatgacattagtccccacacttctaaaattacaaaaa
aaacgcataattgaaattggatatgttgttaataatcgggcaaaagtcaaaaaaattaat
gcatttaagcctattaaatcagttgatttttatcaagaacaaagacaacaactgcgacca
tctgcggtaaagcaagcgcgattgctttcatatttgatgcaatcaccgcaaacatttgtt
ccggtgaaagaggttattaaatcgtatcaattagattatgcagtattaaagcaagcagag
ggtaaaggttggattgttcaaaaaccattagagtcttatcgaattcccaaactcagtaca
cctgtgaaaaatagccaaccgttaactttgaatgcagagcagcaagaagcttatatagca
attgcaaacaatatttcagaaaatgatacaaagacatttttattagaaggtgtaacagga
tctggaaaaacggaaatatacctacaagccattgcaaaggcactttctgaaggacaaacg
gctttaatgttagttcctgaaattacattgacaccacaaatggttcgacgtgtaaagagt
cgttttggtgatgatgttgctgttatgcattcaggattgtcagatggtgaacgatatgat
gaatggcgacgtattcaacggtcagaggtgcacgttgttgttggtgccagatcggctgta
tttgcaccattgaaaaacatcgggctaatcataattgatgaagaacatgaatcctcatat
aaacaggatgagaatccacgatatcatgcacgagatgttgcacagtggcgtgccaatttt
catcatgctacccttgtattgggttcggcaacgccttcattagaaagccgagcgcgtgca
caaaagaatgtctatcatttattgacattagaacatcgtgcaacgaatggtatgttacca
gaaacgcaagttgttgatatgagagaagccatcaagcatggtggtgatgatattttttct
cctcaattgattgaagctattcaaaatcgtcttactaagcaagaacaaattgttttaatg
ttaaaccgtcgtggatatgcgaattttttggtatgtcgtgaatgtggttttacaccacgc
tgtattaattgtgatgttgccctaacagttcataaagatatttcacgcctagtttgtcat
tattgtggttatagcgagactataccaacaaaatgcaaaaattgtggttctaccagaatt
agacaatttggttctggtacgcaaaaagttgcagaacaactaagtgaacaaattccccag
gcacgggtgatacgtatggatgttgataccacccgtagaaagggatcaactgatcaatta
ttaacggcttttggtaatcatgaagctgatatcttgttaggaacacaaatgattgccaag
ggattggattttgcaaatgttactttggttggtgtattaaatgctgatacaacattatca
ttaccagacttcagagcatctgaacgaacttttcaattattaacgcaagtttctggacgc
gcgggtcgaggtgataaacctgggaaggtcattatgcagactttcaatcctgatcattac
gcaattcagctagctagacaacaagattatgaagcattttatcaccaagaaatggcattg
agacacgcttggaaatatacaccgtattattttacgattcagattaaattcgcacatgag
aaaattgatgaatcggcaaaagccgcatatgaaattgctaactggctgaagaatatcatt
gataatgaaaccatcatgttaggaccagcaacagggactattccacgtattaaaaataaa
tattactatcggttagttattaagtatcggcatgacgaaaaattaatacaggcgcttggc
agcttaataaaaaaaggtcagcaattacaaaaacaaggaattacaataattattgatcgt
gaaccaattaatttcatgtag
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