Weissella paramesenteroides: CO680_02610
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Entry
CO680_02610 CDS
T05120
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CO680_02610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_02610
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO680_02610
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO680_02610
RecFOR pathway proteins
CO680_02610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
AAA_22
Sigma54_activat
AAA_3
AAA_25
AAA_14
nSTAND3
Sigma54_activ_2
DUF815
AAA_24
NB-ARC
RNA_helicase
TsaE
AAA_18
AAA_17
IstB_IS21
Rad17
NPHP3_N
NACHT
NTPase_1
AAA_33
Parvo_NS1
AAA_PrkA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ATF41006
UniProt:
A0ABD4XKY9
LinkDB
All DBs
Position
489889..490899
Genome browser
AA seq
336 aa
AA seq
DB search
MAEDFLHDMSTDTGEQSIEQTLRPSTLQQYIGQEDLKQRLHVYIEAAKQRSEPLDHILLY
GPPGLGKTTLAMVVAHEMGVGLRTTSGPAIEKSGDLLALLNELAPGDVLFIDEIHRLPKQ
VEEMLYSAMEDFYVDIIAGEGPTAHPIHFPLPPFTLVGATTRAGMLSQPLRDRFGIVEHM
AYYTPGELSKIIQRSADIFNIEVADEGAYELARRSRGTPRIANRLLRRVRDFTTVKGLKT
ITDEMVNFSLALLQIDGMGLDEVDHKILETMIKFYQGGPVGVGTIAANIGEEVDTIESVY
EPYLLQIGFLQRTPRGRVVTLAAYEHLHLPLPDKNN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggactttttacatgatatgtctactgacactggtgaacagtcgattgaacaa
acattgcgacccagtacattacagcagtatattggccaagaagatttgaaacaaagattg
catgtctatattgaggcagcaaaacaacgttcagaaccgttagaccatattttgttatat
ggaccaccagggttagggaaaacaacccttgcaatggttgtagctcacgaaatgggcgtt
ggcttgagaacaacgtctggccctgcaattgaaaaatcaggggatctattggcgttgtta
aacgaactggcaccgggtgacgttctttttatcgatgaaattcatcgtttacctaagcaa
gttgaagaaatgttatattctgcaatggaagatttttatgtcgatattatagccggagaa
ggtccaactgcgcatccaattcattttccattaccaccatttacattggttggtgcgaca
acaagagcaggtatgttgtcgcaaccattacgtgatcgttttggtatcgttgagcatatg
gcatactatacgccgggtgaactttcaaagataattcagcgttcggctgatatctttaat
attgaagttgcggatgaaggtgcgtacgaacttgcgagacgatcgcgaggaacacctcgt
atagcaaatcgcctgttgcgacgcgttcgtgattttacaactgttaagggattaaaaaca
attactgacgaaatggtcaatttttcgcttgctttattgcaaatagacggcatgggattg
gatgaagtagaccacaaaattttagaaacaatgattaaattttatcaaggtggaccagtt
ggtgttggtacaatcgccgctaatattggtgaagaagttgatacgattgaatcagtgtat
gaaccatatttattacaaattggcttcttacaacgaacaccacggggacgtgttgttact
ttggcagcgtatgaacatctgcatttgcctttacccgataaaaataattag
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