Weissella paramesenteroides: CO680_02670
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Entry
CO680_02670 CDS
T05120
Name
(GenBank) ATP-dependent helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wpa
Weissella paramesenteroides
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wpa03019
]
CO680_02670
03009 Ribosome biogenesis [BR:
wpa03009
]
CO680_02670
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CO680_02670
Messenger RNA biogenesis [BR:
wpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CO680_02670
Ribosome biogenesis [BR:
wpa03009
]
Prokaryotic type
rRNA helicases
CO680_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_30
Helicase_RecD
Microtub_bd
CMS1
Antimicrobial_4
Motif
Other DBs
NCBI-ProteinID:
ATF41012
UniProt:
A0A5M9EFE9
LinkDB
All DBs
Position
501573..502931
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AA seq
452 aa
AA seq
DB search
MAKFTDYNLRPEIYEALTAIHFKQPTTVQSRLIPVILQGRSVVGQSQTGSGKTHTFLVPI
FQQYDATNQKVQAVITTPSRELAQQIYEAAKQLASTFTEDTQPRISLYVGGMDKSRQIHQ
LQNKQPQIVIGTPGRIKDLYQAGELDIHTATTLVVDEADMTLDLGFLPDVDAIASAMPED
LKMLVFSATIPQKLQPFLKKYLSNPVIEEIPSETVIAPTIKNILVGTKGETKDTLVYNLL
TMGNPYLALVFTNTKTRARELTKSLRSRGLKVAEIHGGIQPRERKRTMQQIQHLDYQYVV
ATDLAARGIDIPGVSLIINDGIPTELEFFIHRVGRTGRNGMSGTAITIYNPDEEDRVQMV
ENMGVKFEPMTYAHGELQSGYDRRRRRQRTKTTAKLDPTMIGMVKKKKKRVKPGYKRQIK
NNIARDAKYKKRVAERETLRAAKKAKKRAHDK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatttactgattacaatttacgtccagagatatatgaagctttgacggcaata
cattttaaacaaccaacgactgttcaatcaagactgattcctgttatcttgcagggccgt
tctgtcgttggacaatcacaaacaggttcaggtaagacacacaccttcttggtgccaatc
ttccagcaatatgatgcgacaaatcaaaaggttcaggcagtcattacgacaccctctcgc
gaattggcgcaacaaatttatgaagcagcaaagcaattagcaagtacttttactgaagat
actcaaccaagaatcagtttatatgttggtggaatggataaaagtcgtcagattcatcaa
ttacagaataaacagccacaaattgttattggaacacctggacgaatcaaggacttatat
caggctggtgaattagatattcataccgcaaccacactagttgtggatgaagcagatatg
acacttgatttaggttttctaccagatgttgatgctatcgctagtgcaatgcctgaagat
ttgaaaatgctggtcttttcagcaacaattccacaaaagctacaacccttcttaaaaaag
tatttatcaaacccggtaattgaggaaattccatctgagacagtcattgcaccaaccatt
aaaaatattttggttggaacaaagggtgagacgaaagatacgttagtttataacttattg
acgatgggtaatccctatttagcattagtttttacaaatacgaaaacgcgagcacgtgag
ttaactaaaagtttgcgtagtcgtggcctaaaagtggctgaaatacatggtggtatccaa
cctcgtgaacgtaagcgcacaatgcagcaaattcaacatttagattatcaatatgttgtt
gcaaccgatttggctgctagaggaattgatattccaggcgtgtcacttattattaatgat
ggtatcccaacggaattagagttcttcattcatcgagttggacgaacgggtagaaatggt
atgtctggaacggctatcacaatttataatccagatgaagaagatcgcgtacagatggtt
gaaaatatgggcgtgaaatttgagccaatgacatatgcccatggtgaactacagtctgga
tatgatcgtcgtcgccgtcgtcagcggaccaaaactacagccaaattagatccaacaatg
attggtatggtgaagaagaagaaaaagcgagtaaaaccgggttataaacgtcaaattaaa
aacaatattgcccgagacgcaaaatataagaagcgggttgctgaacgtgagacgttacgt
gcagcaaagaaagcaaaaaaacgcgcccatgacaaataa
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