Weissella paramesenteroides: CO680_02965
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Entry
CO680_02965 CDS
T05120
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wpa
Weissella paramesenteroides
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wpa03032
]
CO680_02965
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_02965
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CO680_02965
DNA replication proteins [BR:
wpa03032
]
Prokaryotic type
DNA Topoisomerases
CO680_02965
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO680_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF
Cys_rich_KTR
Toprim_4
Pox_mRNA-cap
Motif
Other DBs
NCBI-ProteinID:
ATF41060
LinkDB
All DBs
Position
554699..556840
Genome browser
AA seq
713 aa
AA seq
DB search
MASQTAVKEKKARAVKSTTTKTKSRAKTKAKQKKNLVIVESPSKAKTIEKYLGRNYKVVA
SIGHIRDLPKSTMGVDIENDYQPKYINIRGKGDIIKSLKKEAKASKHVYLASDPDREGEA
IAWHLSHILDLDVDASDNRVVFNEITKDAVKDAFKHPRKINMDLVDAQQARRILDRLVGY
SLSPILWKKVKKGLSAGRVQSIALGLVIKREQEIQTFQPDEYWSLDTMFKKDRTKFKAVF
YGLDGKKAALPDNDAVQEVLKKLDRTAPFNITNVVTKDRKRNPQPPFTTSTMQQAANTQL
NFKTRKTMMAAQQLYEGINLGGKNGTVGLITYMRTDSVRLSDTAKTEAASFINDEYGSEY
AATKPVEGKQQEGAQDAHEAIRPTSVFRTPLSVKDKLTNDQFKLYQLIWSRFVASQMTPE
ILATMAVTIEQNGVTFRANGSQTKFAGFTKAYPAAKNKDNKLPSLVTGDAVDMVSMSPEQ
HFTQPPARYTEATLVRALEENGVGRPSTYAATIETIQRRAYVRLDTKKFVPTELGELVQN
TVQEFFPDVTNIKFTAQVETDLDNVEAGQKYWVKVVDDFFTPFSKELETAEKEMEKIVLK
DELAGFDCDICGAPMLKKLGRYGKFYACSRFPDCRNTKTIVEEIGLLCPKCKMGQIVERK
TKRGRKFYGCSRYPECDFVSWDKPTEKTLPDGTTPKDETDDKENSVETSKTSK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagactgctgttaaagaaaaaaaggcgcgtgcggtgaaatcaacgacgaca
aaaactaaatctcgagcgaagacaaaggcaaagcaaaaaaagaatttagtgattgttgaa
tcaccatcaaaagcaaaaacaattgaaaaatatctgggacgaaactataaagtagtcgca
agtattggtcatattcgtgatttacctaagtcaactatgggtgtggatatcgaaaacgat
taccaaccaaagtacattaatatacgcggtaagggcgatattattaaatctttaaagaaa
gaagcaaaggcttctaaacatgtctacctggcatccgatccggatcgagaaggggaagcg
attgcttggcatttatcacatattctagatcttgatgtagacgcaagcgataaccgggtg
gtatttaatgaaatcaccaaagatgcagtgaaagacgcctttaaacatcctagaaaaatt
aatatggatcttgtcgatgcacaacaagctcgacgtatcttagatcgtttggttgggtat
tcattatcacctattctatggaagaaagttaaaaaaggattatctgcaggtcgtgtacaa
tcaatagctttagggcttgttattaaacgtgagcaagaaattcagacattccaaccagat
gaatattggtcattggacacaatgttcaaaaaggatcgtacaaaatttaaggctgtgttt
tatggccttgatggtaaaaaggcagctttaccagataatgatgctgttcaagaggtcttg
aaaaagctggatcgaacagcaccatttaatattactaatgttgttacgaaggatcgcaag
cgcaatccacaaccaccttttaccacttcaacaatgcaacaagcagctaatacgcagttg
aattttaaaactcgtaaaaccatgatggcagcccaacagctgtatgaaggaattaatttg
ggtggtaaaaatggcacggttgggttaattacttatatgcgtactgattcggttcgatta
tctgatactgccaaaacagaagcagcatcatttattaatgatgagtatggttcagagtat
gcggctactaagccagttgagggaaagcaacaagaaggtgcgcaagatgcgcatgaggct
attcgaccaacatcagttttccgtacgccattatctgtaaaagataaattaacgaatgat
caatttaagttatatcagttgatttggtcacgatttgttgccagtcaaatgacaccagaa
attttagctacgatggcagtaaccattgaacaaaatggtgtgactttccgtgctaatggt
tcacaaactaagtttgctggatttacaaaggcatacccagctgcaaaaaataaagataat
aaattacctagcttggtaactggcgatgctgtggatatggtgtcaatgtcacctgagcag
cactttacacagccaccagcccgatacactgaagcaaccttggtgagagcgttggaagag
aatggtgttggacgcccatctacatatgcggcaacgatagaaacgattcaacgtcgagcc
tatgttcggttagacaccaaaaaatttgtgccaactgaactgggagaactggttcaaaat
actgttcaagagtttttcccagatgtaaccaacattaaatttacagctcaagttgagaca
gacttagataatgtggaagctggtcaaaaatattgggtgaaagtagttgacgatttcttt
acacctttctcaaaagaattagagacagctgaaaaagagatggaaaagattgtcctaaag
gatgagctggcaggttttgattgtgatatttgtggtgcaccaatgcttaagaaattaggt
agatatggcaagttttatgcttgctctcgcttcccggattgtcgcaatactaaaacaatt
gttgaagagatcgggctactttgtcctaagtgtaagatggggcaaatcgttgagcgaaag
acaaaacgtggtcgcaagttttatggatgctcacgttatcctgaatgtgactttgtctca
tgggacaagccaacggaaaaaacgttaccagatggtacaacacctaaagatgaaaccgat
gataaagaaaattcagtagagacatcaaaaacttcgaaatag
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