Weissella paramesenteroides: CO680_03555
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Entry
CO680_03555 CDS
T05120
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03420
Nucleotide excision repair
wpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO680_03555 (pcrA)
03430 Mismatch repair
CO680_03555 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_03555 (pcrA)
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO680_03555 (pcrA)
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO680_03555 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CO680_03555 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATF41172
LinkDB
All DBs
Position
682885..685164
Genome browser
AA seq
759 aa
AA seq
DB search
MNPLLAGMNDKQAEAVMTTEGPLLIMAGAGSGKTRVLTHRVAHLIQDLDVLPWRILAITF
TNKAAREMKERISQLVEESDAEAVWVSTFHALAVRILRRDIDKLGYKKDFSIIDASAQRT
LIKRILKDFNVDIEKYAPRSVLGAISNAKNAMEGPEEYVKKATGPFEEIVGKAYKEYQHR
LALAQSLDFDDLIMLTIELLHKDQEVLSYYQEKFLYVHVDEYQDTNDAQYELVTLLSAKH
RNLAVVGDSDQSIYGWRGANMQIILNFSKEYPDAKTVMLEQNYRSTQTILDAANAVIRNN
NERIAKKLWTDNGEGEKITYYRGQSDRSEALFVIKEIRDAVDTQQHDYKDFAVLYRTNAQ
SRGVEEALVKANMPYTVVGGSKFYDRKEIRDVLAYLSLVTNPADNENFLRIVNEPKRGIG
QTSLEKLRRFALENNWTLLDSAANATLIPGLSARAANKLTDFAKMISDFIKQMSFDLSLT
DLTKSILEKSGYEAQLKKSPTPENEGRLENLSEFLSVTEEFDKNYEPSDESISKYVDFLG
ELALVSDLDNVDENSNNQITLMTLHAAKGLEFPVVFLVGMEENIFPLSRAAADDDQLEEE
RRLAYVGITRAKEKLFLTNAYSRLLYGRTTSNPASRFIDEIDAKLIDEKYDGSGFQSLNR
ERDLPFSKRSVPAQGVTFSGRKRQQPVQLTSQSRPNVTNTGAEKKDWVIGDAVQHKKWGI
GHVIKITGDGEDKELDIAFPAQGIKRLLAAFAPISKVEK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttacttgcgggtatgaatgataagcaagctgaagctgttatgacaacagaa
gggccactattaataatggctggtgcgggttctggaaaaacacgtgtgttaacgcatcgc
gtcgctcatctaatacaggatttggatgttttaccttggcgtattttggcaatcactttt
accaataaagctgcgcgtgagatgaaagaacgtattagtcagcttgtggaagaatcagat
gccgaagctgtttgggtatcaacttttcacgctctggcagttcgtattttacgtcgtgac
attgataagctaggttataaaaaggacttttctattattgatgcaagtgcccagcgtact
ttaataaaacgaattttaaaagacttcaatgttgatattgaaaaatatgctcctcgttca
gtattaggtgccatttctaatgcaaagaatgcgatggaaggacctgaagaatacgtcaaa
aaagcaacagggccatttgaagaaattgtcggtaaagcttataaggaatatcaacaccgt
ttagccttagctcagtcactagactttgacgatctgattatgcttacaatagagctatta
cacaaagatcaagaagttcttagttattatcaagaaaagtttctttatgtgcatgttgat
gagtatcaagacacgaatgatgcacaatatgagttagtaacgttactttcagcaaaacat
cgtaatttagcggttgttggagattcagaccaatcaatttatggctggcgtggtgcaaac
atgcagattattctgaatttcagtaaagaatatcctgatgccaaaacagtcatgcttgag
caaaattaccgatcaacacaaacaattcttgacgctgccaatgcagtgatccgtaataac
aatgaacggattgctaaaaaactttggactgataatggtgaaggtgaaaaaatcacatac
tatcgtggtcaatctgatcgttcagaagccctctttgttattaaagaaattcgtgatgct
gttgatacacaacaacatgattataaagattttgccgttttatatcgaacaaatgcacaa
tcgcgtggggttgaagaggcgttggtaaaggccaacatgccatatactgtcgttggcggt
tcaaaattctatgatcgtaaggaaatccgtgatgttttggcgtatttgtcattagtaaca
aatccagctgataatgaaaatttcttacgcattgttaatgaaccaaaacgtggtattggt
caaacttcactagagaaattacgccgatttgcgctagaaaacaattggacacttttggat
agtgcagctaatgcgactttaattcctggactttctgcaagagcagcgaataaactaact
gattttgctaaaatgatttcagactttatcaaacaaatgtcatttgatttaagcttaact
gatttaacaaaatctattttagaaaaatctggctatgaagcccaactcaaaaagtcacca
acaccagaaaacgaaggacgacttgaaaatttgtccgagtttttatcagtcacagaagaa
tttgataaaaactatgaaccaagtgatgaaagtatctcaaagtacgttgactttttgggg
gagttagcattagtttctgatttagataatgttgacgaaaatagtaacaaccagattaca
ctaatgacacttcacgctgcgaaaggattggaattccctgtggtatttctagttggtatg
gaggagaatattttcccattatcaagggcagccgcagatgatgatcagcttgaagaggaa
cgtcgtctagcctatgtgggtattacgcgcgcaaaagaaaaactatttctaacaaatgct
tattcaagattattatatggacgaacaaccagtaatcctgcgtcaagattcattgatgaa
attgacgcaaagttaatcgatgaaaagtatgatggttctggtttccaatctttgaatcgc
gaaagagatctaccattcagtaaacgttccgttccggcacaaggagtaacatttagtggc
cgtaagcggcaacaacctgtccagctcactagtcaatcaagaccaaacgtcacaaatact
ggtgctgaaaagaaggattgggtaattggtgatgccgttcaacataagaagtggggaatt
ggtcatgtcatcaagattacgggagatggcgaagataaagaattagacatcgcttttcca
gctcaaggcattaaacgactattagctgcctttgctcccattagtaaagtcgaaaaatag
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