Weissella paramesenteroides: CO680_04945
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Entry
CO680_04945 CDS
T05120
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
wpa
Weissella paramesenteroides
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wpa03019
]
CO680_04945
Messenger RNA biogenesis [BR:
wpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CO680_04945
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
HDOD
Motif
Other DBs
NCBI-ProteinID:
ATF41441
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All DBs
Position
complement(977465..978433)
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AA seq
322 aa
AA seq
DB search
MAKELKDYQLDERVETFALLKEVDARVTQQGKRYLALQLADRSMDIKGMKWDTTDAEVNE
LHAGIVVYIQAVRQAYQDKPQLKVLSIRPSKIGEPQDPADFVAAAPMKKQYMAEEVSAII
FQITNANWQRIVRHILGKYREQFLQFPAAKSNHHAFAGGLAFHTLSIVHLAQAVVKQYDN
LDASLLYAGALLHDIGKVIELSGPVATQYTTAGNLIGHIVLVDEEIVLAATELQIDLKSE
DMIILRHTVLAHHGLLEYGSPVRPMIKEANVLHQLDELDAGMQSFDNALAETNPGEFSPR
QWALDNRSIYRPAGGHPGNETR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagaattaaaggattatcaattagatgaacgtgttgaaacctttgcattactc
aaagaagttgatgcacgggtgacacagcagggaaaacgatacttagctttacaattggct
gaccgttcaatggacattaaggggatgaagtgggatacgaccgatgccgaggtcaatgag
ttacatgcaggaatcgtggtctacatccaagcagtgcgtcaggcgtatcaagataaacca
caactaaaagttttgtcgattcgaccaagtaaaattggtgaaccacaagatccagcagat
tttgtggcggcagcaccaatgaaaaaacaatatatggctgaagaagtttcagcaattatt
tttcagataacaaatgctaactggcaacgaattgttcgtcatattcttggtaaatatcgt
gagcaatttctacaatttcccgctgcgaaaagtaatcatcatgcgtttgctggtgggtta
gcctttcatacgttgtccattgttcatttggcacaagctgtggtcaagcaatatgataat
ttagatgctagtctgttatatgctggcgcattattgcatgatattggtaaagtgattgaa
ttatcaggaccggtagcaacgcaatatacaaccgctggtaatttaattggccatattgtg
ttagttgatgaagaaattgttttagcagcaacagaattacagatcgatctgaaaagtgaa
gacatgattattttacgtcacacggttttggcgcatcatggtttattagaatatgggtcg
ccggtacgtccgatgatcaaagaagccaatgtgttgcatcaacttgatgaattggatgct
ggtatgcagagttttgacaatgctttagccgagactaatccaggcgaattttcacctcgt
caatgggcattagataatcgcagtatttatcgaccagccgggggtcatcccggaaatgaa
acaaggtag
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