Weissella paramesenteroides: CO680_05845
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Entry
CO680_05845 CDS
T05120
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03030
DNA replication
wpa03430
Mismatch repair
wpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO680_05845
03430 Mismatch repair
CO680_05845
03440 Homologous recombination
CO680_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wpa03032
]
CO680_05845
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_05845
Enzymes [BR:
wpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO680_05845
DNA replication proteins [BR:
wpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO680_05845
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO680_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATF41599
LinkDB
All DBs
Position
complement(1148348..1148881)
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AA seq
177 aa
AA seq
DB search
MNFIAMDFETASAKRYSAVSLGLAVVRDNKLVDEFYTLIKPDSFFDKRNTRIHGITEADV
RNAPIFPEVWEQIQQFYTPNQLVIAHNAPFDNGVLRETLTHYDIDLPHYLSLDTVRTSRK
LYPELPNHKLNTVAAALGIDLKHHHNALNDTVAAAEILVRQATDFGVEPLKQLVKVI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttattgcaatggactttgaaactgcaagtgctaagcgttatagtgctgtatcg
cttggattggcagttgtgcgcgataacaaacttgttgatgaattttatacattaattaaa
ccagatagtttttttgataagcgtaatactcgtattcatgggattaccgaagctgatgtc
cgtaatgcaccaatttttccagaagtttgggagcaaattcagcagttttatacacctaat
caattagttatcgctcataatgcgccgtttgataatggtgttttgcgagaaacattaact
cattatgatattgacttgccgcactatctatctttagatactgtgcgcacgtcacgaaaa
ctttatccagaattaccaaatcataaattaaatacggtagcagcagcgctaggaattgat
ttaaaacaccatcataatgcacttaatgacacagtagcggcagctgaaattttagtacga
caagcaactgattttggtgttgaaccattgaaacagttggttaaagtgatttaa
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