Weissella paramesenteroides: CO680_05870
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Entry
CO680_05870 CDS
T05120
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CO680_05870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_05870
Enzymes [BR:
wpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CO680_05870
DNA repair and recombination proteins [BR:
wpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CO680_05870
Prokaryotic type
CO680_05870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATF41604
LinkDB
All DBs
Position
complement(1152163..1152846)
Genome browser
AA seq
227 aa
AA seq
DB search
MKIGVDMPELLPKDWADALQPVLQPNYIGRIQEFLDTVYLVDTVYPERQNVFAALKETPL
NKVKVVILGQDPYPNPGQAQGLSFSVPATMALPKSLINIYKELTDDLAVTAPNNGDLHRW
AKQGVLLLNTVLTVPAHHAGGHAGEVWEQLTDEIIKLVAERNQPTVFILWGKQAQNKKQL
INGEQNLVLKAPHPSPLSAYRGFFGSKPFSKTNEFLQKNNVAPIKWV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggagtcgatatgccagagctattaccaaaagattgggcagatgcattgcaa
ccagtattgcagccaaattatattggtcgcatccaagagtttttagatacagtttattta
gtcgatacggtgtatccagaacgacaaaatgtatttgctgcgttaaaagaaaccccttta
aacaaggtgaaagtcgtgattttagggcaagatccatatccaaaccctggccaagcgcag
gggttgagtttttctgtaccagcaacgatggccttacctaagtcattgattaatatttat
aaagaattaacagatgatttagcagttactgcacccaacaatggtgatttacatcgttgg
gcaaaacaaggtgttttactgttaaatacagttttaacagtaccagctcaccatgctggg
ggacatgcaggcgaagtatgggaacagttgactgatgaaattattaaattagtcgcggaa
cgaaatcaaccaactgtatttattttgtggggtaaacaagcgcaaaataaaaagcagctc
attaatggtgaacaaaatttggtgttgaaagcgcctcatccaagtccattgtctgcttat
cgtggtttttttggctctaaaccattcagtaaaaccaacgaatttttgcaaaaaaataat
gttgcacctattaagtgggtataa
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