Weissella paramesenteroides: CO680_06975
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Entry
CO680_06975 CDS
T05120
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
wpa
Weissella paramesenteroides
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_06975
Enzymes [BR:
wpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO680_06975
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CO680_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATF41801
LinkDB
All DBs
Position
complement(1400527..1404093)
Genome browser
AA seq
1188 aa
AA seq
DB search
MALELLFGRSSADHELALLQRVQQVLATDEQAQVFYIVPNHIKFETEINVLTRLATLSGR
HGAAIAVPNVSVFSLSRLAWYYMQNDPIYQQANLSQNGLTMLVQTLLQQHKAELKLYGNL
LTKQGFIGQFTTQLLELKQSGLSWDDVTDIADKLTNQETLQMKLYDLATIGQSLEDELAQ
RGQYLSSDLLLALKVYLATEKTDISHHYFFINDYSQMTSPERGLVEALITYAGGVTIALP
ADDGSASLTESAISENDLFYRPKNLGRQLRDAAVTHKIPVIANTIEAQRKMSSGMLAVED
FWIKYAQQGIIRDSYDADDAIEIWQTHTRYQEVEQMARLIRQEVAAGKHRYRDYLLMTRD
LGQYENIMPAVFARYEIPIFMDLDRPMSAHPLVAFLDKLLHLAPAYTMTDVMGLLKTELL
IPDGVLLADYREALAETENYVLAKNIAGWQWTDKTPWQYDRQALTSDDEVTRERVASKDA
QLAMIHDQISQTVAPFLHHLQQAPTAREMARELYNFITQIGIQKRLINWRDNAIEQGDLW
SAQQPEQVWRVFISILDDFVQVFDSEVMTLEVLQDVFTAAFDSAKYAGIPATMDQVHISE
SGIVQRTGYETVIVFGATNHNLPAVTRIKAILHDGDRAILQPALPDNVFLKETSEQQMAQ
ESLLMYRAMMVADQRLIWTYATSDGDGSQQPSTYVTRIQKQFQLPLVQFDALPDPMSHHV
DDYVGTPTSTIAQIIIANRQAKQRGTVDGQLSAAWRNLIQQVQKIAPYQLQHLLGSLHYQ
NEPEKLQPVLVNTLFGHDLKASISRLESYSRNPYEFFLQYGLRLQERQVLQLTPAEKGTL
MHAMLEQLFQTLVTKQQVLGALTDDQLRHLEQDILQGLLTSDDPTYDIFNSSSRMRFLTQ
QLAIQVHETMISMKRGQLLDGGVHTIGVEAGFGLPQSQLKPVEYDMPFGRVKVRGKVDRY
DLVETNAGNFLTIVDYKSSKRVFDYSKAYAGLELQLMTYWTAMLMNKDVLPAGEMGGALF
WTLQNPWISMNDLTGDTLQQLQSAADKQAIEQGRYRGVLRTNDDYISRLESTPDIVAPYA
IDRKKDNSFKKTADVVSDDTLATLLQFNEYKIKDIAERILEGTFPLYPFRDGAASTGLMY
SPYKPIMMFDAMMGNRYNNLEKLSVSAALEAMSRFIQKHHQEPEEGQK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagaattattattcggtcgatcaagtgccgatcatgaattggcattattgcag
cgagttcagcaggttttagcgacagatgaacaagcgcaggtattttatattgtcccaaat
catatcaaatttgaaacagaaataaatgttttgacaagattagcaacattatcaggacga
catggggcggcgattgctgtacctaatgtgtcggttttttcattaagtcgtttagcatgg
tactacatgcaaaatgatccaatttatcaacaagctaatctatcacaaaacggattaaca
atgttggtgcaaacattattgcaacaacataaggcagaattgaagttgtatggtaattta
ttaactaaacaggggtttattggacaatttacgacgcaattattagagttaaaacaatcg
ggtttatcatgggatgatgtgacagatattgctgataaattaacaaatcaagaaacctta
cagatgaagttatatgatttagcaactatcggtcagtcattggaagatgaattagcgcag
cgtggtcagtatttaagtagcgatttattattggcgttaaaagtgtatctggcgacagaa
aaaacagacatttcacaccattatttctttatcaatgattattcacaaatgacatcacct
gagcgcgggttggttgaagcgttgattacatacgcaggcggggtcactattgccttacca
gcagatgatgggtcagctagtttaacggaatcagcaatttctgaaaatgatttattttat
cggcctaagaatcttggacgacaattacgtgatgccgcggtgacgcacaagatacctgtg
attgcaaatacgattgaggcgcagcgtaaaatgagttcaggcatgttagctgttgaagat
ttctggattaaatatgcgcaacaaggaattatccgtgattcatatgatgcggatgatgca
attgaaatttggcaaacacatactcgttatcaggaagtagaacagatggcgcgtttgatt
cgtcaagaagtcgctgccggtaaacatcgatatcgtgattatttactcatgacacgtgat
ttgggtcagtatgaaaatatcatgccagcagtttttgcacgttatgaaattccaatattt
atggatttagaccgaccgatgtcagcgcatcctttggttgcttttttggataaattacta
catttagccccagcatatacaatgacggatgtcatgggtctcttaaaaactgaattgtta
ataccagatggtgttttattggcggattaccgtgaagctcttgcagaaactgaaaattat
gtgttggcaaaaaatattgcggggtggcaatggactgataaaacgccttggcaatatgac
cgccaagcgctaacgagtgatgatgaggtgactcgtgaacgggttgctagtaaagatgcg
cagttagccatgattcatgatcaaattagtcagactgttgcaccatttttacatcatttg
caacaggcaccaactgcgcgtgaaatggcgcgtgaattatataattttataacgcaaatc
ggcattcaaaaacgtctaattaactggcgagataatgctattgaacagggtgatttgtgg
tctgcacaacaaccggaacaagtttggcgtgtttttattagcattttggatgattttgtc
caggtatttgattcagaagtcatgacacttgaagtgcttcaagatgtttttacggctgct
tttgatagtgccaagtatgctggcattccagcaacgatggatcaagtacacatttctgaa
agtggtattgtgcaacggacggggtacgaaactgttattgtattcggagcgacgaatcac
aatttaccagctgtaactcgtattaaagcaatcttgcatgatggcgaccgagcaatacta
caaccagctttgccagataatgtttttttgaaagaaacttcagaacaacaaatggctcaa
gagtctttgttgatgtatcgagcaatgatggtagcggaccaaagattaatatggacgtat
gcaacaagtgatggggatggctcacagcaaccatcaacctatgtgactcgtatccaaaag
cagttccaactaccgctagtgcaatttgatgctttaccagatccaatgagtcatcatgtt
gatgattatgttggaacaccaacaagtacgattgcacaaattattatcgctaatcggcaa
gcaaaacaacgtgggacggttgacggacagttgagcgctgcttggcgtaatttgatacaa
caagtacaaaaaatagcgccatatcaattgcaacatttgttgggtagtttacattatcaa
aatgaaccagaaaagttacaaccagtactagtaaatacgctttttggacatgacctgaag
gcatcaatttcacgtttagaaagttattcacgtaacccttatgaatttttcttacaatat
ggattgcgactacaggaacgacaagtattacaattaacgcctgctgaaaaaggtaccttg
atgcatgccatgttggagcaacttttccaaacattggtaacaaaacaacaagtattagga
gcattaacggacgaccaattacgtcacctagaacaggatattttacagggacttctgaca
agtgatgatccaacgtatgatatttttaatagttcatcacggatgcgtttcttgacacaa
caacttgctatccaggttcatgaaacgatgatcagtatgaaacgtggtcaactgcttgat
ggtggggttcatacaattggtgtggaagccgggtttgggctaccacaaagtcaattgaaa
ccagtcgaatatgacatgccatttggtcgtgttaaagtccggggaaaagttgatcgttac
gatttagttgaaacgaatgcgggcaactttttaacgattgtcgattacaagtcaagtaaa
cgtgtgtttgattatagtaaagcgtatgccggtctagagttgcaattaatgacctattgg
acagcaatgttaatgaataaagatgttttaccagctggtgaaatgggtggtgcgctattc
tggacgcttcagaatccatggatcagcatgaatgatttgacaggtgatacattacaacag
ttgcaatcagcagctgataaacaagcaattgaacaaggccgttatcggggtgttttgcgt
acaaatgacgactatatttcccgcttagaaagtacacctgatattgttgcaccatacgct
attgatcggaaaaaagataactcgttcaagaagacagcggatgttgtttcggatgatacg
ttagcgaccttgctacaattcaatgaatacaaaatcaaagatattgctgaacgaatttta
gagggaacttttccgctatacccattccgagatggtgcagcaagtacaggattaatgtat
tcaccttataaaccaattatgatgtttgatgccatgatgggtaatcgttataacaatctt
gaaaaattatcggtgagtgcagcattagaggcgatgtcacgatttattcaaaaacatcat
caggaaccagaggagggtcaaaaataa
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