Weissella paramesenteroides: CO680_09400
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Entry
CO680_09400 CDS
T05120
Name
(GenBank) GntR family transcriptional regulator
KO
K03492
GntR family transcriptional regulator, regulator of glucomannan utilization
Organism
wpa
Weissella paramesenteroides
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
wpa03000
]
CO680_09400
Transcription factors [BR:
wpa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CO680_09400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_Crp_2
HVO_A0261_N
WHD_CvfB
TrmB
HTH_41
Rrf2
HTH_11
DUF5817_CT
HTH_9
Motif
Other DBs
NCBI-ProteinID:
ATF42247
LinkDB
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Position
1899543..1900274
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AA seq
243 aa
AA seq
DB search
MAKEVLYIKVLNDLNRRINAQEFPDLKLPDERSLASSYGVSRSSIKRALTVLVQQGIIFK
KRGSGTFVNPLYLKNQGMFHAVGQNLGVSDSFRFKGETPAIKLLVFEKEIANEEDREALF
LEQDEEVYRIKRLRTLQDKVFMIENAVVPVKLLPMLTAEDMTHSMFQYAEQTTNKAVTKS
FMTVTAEPSSEEDQQYLNLKPTEPVGVMSGVYFLDDGTPFEVGQMRVHYEYMRYNSFVSL
DGE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaagtactctatataaaagtgctcaatgatttaaaccggcgtatcaatgcg
caagaattcccggatctaaagttaccagatgagcggtcattagctagttcatatggtgtt
tcacgaagttcgatcaaaagagcattaacggtgttggtgcaacaaggcatcattttcaaa
aaacgtggatcaggaacctttgttaatccgctctatctaaaaaatcaaggtatgtttcat
gcggttggtcaaaatttaggtgtctctgattcatttcgttttaaaggagaaacgccagca
attaaattgctcgtttttgaaaaagaaattgcaaatgaggaagaccgagaagccttattt
ttagagcaagatgaagaggtttatcgtattaaacgtttgcgtacgttgcaggataaagta
tttatgattgaaaatgcggttgtgccagtgaagctattaccaatgctaacagctgaggac
atgacccattcaatgtttcagtatgctgagcaaacaaccaataaagcagtcaccaaatca
tttatgactgtcacagcagaaccttctagtgaagaagatcaacaatatttaaacttaaag
ccgacggaaccggttggtgtgatgtctggtgtgtactttttagatgatggtacccccttt
gaagttggacaaatgcgcgttcattacgagtacatgcgttacaatagtttcgttagttta
gatggtgaataa
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