Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP0223
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Entry
WP0223 CDS
T00719
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wpi
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Pathway
wpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WP0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wpi03019
]
WP0223
Messenger RNA biogenesis [BR:
wpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WP0223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CAQ54331
LinkDB
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Position
233185..234819
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AA seq
544 aa
AA seq
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MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGIGFADETMPGVELLIADVDFIA
QRKKDLLGIIITHAHEDHCGAVPHLWEDLQCPIYTTKFTVNFLKEKLKEFRLEGVVPVKE
VDINGSINLGPFTVEFINVTHSIPEANSILISTEAGSALHTGDWKFDPKPVVGLISNIER
LKEIGDKGDLLAAICDSTNILSKHDPESESEIYDNIYNIIKRSKKLVAVSLFASNVARIE
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPEFLEAKEAVNFPREKLVLLCTGC
QGEPLAATARLASKSHQAFKMQQGDTMIFSSKIIPGNETRAHNTLNAFIEMGVEVITEKT
ENVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTDAHVKFAKECGVKKAIMIAPGDIV
NLENGEKVSSIDVDYFGIDGMLLRHPECSVIKMRERMRDAGAIVVTAVVNKKNKLLAKPK
VFAPGVFEAQKDAAIMQKIIKKVESAFDSQPIKKIRNKIESSIFSILKEYLLKRPIIEVQ
IEQV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaacaaaaatgagtttttatttcttcctcttggaggagtaggaagaattggg
atgaacgttagcctatatcattatcaaggcaagtggattatgatcgaccttggtatcggt
tttgcagatgaaactatgccaggtgttgagctactcattgctgatgtagattttattgct
caaagaaaaaaagatttgcttggaataataattacacatgcacatgaagatcactgtggt
gcagtgcctcatctgtgggaagatttgcaatgtcccatatatacaacaaagtttacagtt
aattttctcaaggagaaactaaaggagtttcgattggaaggtgtggtacctgtgaaagag
gtagacataaatggcagcataaatttgggtccttttaccgttgagtttataaatgtaact
cactcaattcctgaggcaaattcaatattaattagcactgaagcaggtagtgcacttcat
actggggactggaaatttgatccaaaacctgttgttggattaatttctaatatagagcgt
ttaaaagaaattggcgataaaggtgatctacttgcagcaatttgtgattcaacaaacata
ctgagcaaacacgaccctgaatcagaaagtgaaatttatgataatatttacaatataata
aagcggtctaaaaaattggttgctgtctcgctatttgcctcgaatgtggcgcgaattgaa
acaataagccaagctgcaaaagcactaaatagaaaagtggttttacttggcagatcttta
tggagaatagtgaaagttgctcaggatagtggttatttaactgattctcctgagtttcta
gaagcaaaggaggcagtaaattttccaagggaaaagctggtgctactttgcacaggttgt
caaggtgagccactggcagctaccgcaagacttgcctctaagagtcatcaagcatttaaa
atgcagcaaggtgataccatgatcttttcatcaaaaatcattcctggcaatgaaactcgt
gcacataacacgctcaatgcctttattgagatgggagtggaagttattactgaaaaaaca
gagaatgttcatgcttccgggcatccagtaaaagcagagctaagggaaatgtattctttg
ataaaacctaagatgtctattccggttcatggtgagtatattcatacggatgcacatgta
aagtttgctaaagagtgcggtgtgaaaaaagcaataatgattgcaccaggtgatattgtt
aatttggaaaatggggaaaaagttagctccattgatgtcgactactttggtattgatggt
atgttactccgtcatccagaatgcagcgttataaaaatgcgtgagagaatgagagatgcc
ggagctatcgtagtgacagcagttgtaaacaagaaaaataaactgcttgctaagccaaaa
gtatttgcacctggtgttttcgaagcgcaaaaagatgcagccattatgcaaaagatcata
aagaaggttgagtcagcatttgactcacagccgataaaaaaaataagaaataagattgaa
agttcaatatttagtatcttaaaggaatatttactaaaaagacctataattgaagtccaa
atagaacaggtatag
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