Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP0630
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Entry
WP0630 CDS
T00719
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wpi
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Pathway
wpi03410
Base excision repair
wpi03430
Mismatch repair
wpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WP0630 (recJ)
03430 Mismatch repair
WP0630 (recJ)
03440 Homologous recombination
WP0630 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wpi03400
]
WP0630 (recJ)
DNA repair and recombination proteins [BR:
wpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WP0630 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WP0630 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WP0630 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
WHD_UFL1_5th
Motif
Other DBs
NCBI-ProteinID:
CAQ54738
LinkDB
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Position
687357..689096
Genome browser
AA seq
579 aa
AA seq
DB search
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEDAKVFGLDIIVVDHHLGT
EKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRILREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
CINAGGRIGEASLGARLLSTDDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAH
LGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLS
AKFTNLIIEGGGHSMAAGFSIKEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGAGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTE
LGSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgatattgaaaaacgcagcataacaaatgcactgtggaagttacaagaagca
gatcaaagggagatttttactcttatacagagatttgagttgccagaaatattagcaaga
atattagttgctcgtggtgttaacatagaaaatgcacatgacttcttacacccactaatc
agatcgctattaccagatccctttcacctccttgatatggataaagctgtttctcacata
ataaaagcaataaacaataatgagaatattgcaatatttggtgattacgatgttgatggt
gcaacgtcatcagcattgattaataggtacctaagagcgattgggacacactctataatc
tatattccagatcgtgttgatgagggctatggattgaacacagatgctttattacaactt
aaaaagaatggtattgatttatgtatttctgttgattgcggtacgcttgcatatcaacca
atagaagatgcaaaagtctttggacttgatattatagttgtcgaccatcaccttggaaca
gaaaaattaccaagtgctgtagcagttgttaatcccaaccgccttgatgagagctctcct
tataataacttagcagcagttggagtgtcatttctgctaattgttgctcttaacagaatc
ctacgtgagcaaggattttttaccaacaaaaaagaaccagatttatttgatctactggat
ttggttgctcttggaactgtttgcgatgttatgcagattacaggcctaaatagggctttt
gttttacaaggattaaaagttatgtcagcaagaaaaaatgttggcttacgtgttttgttt
gacgctttgggaatccttgaaaaaccaagtgtttcacgattagggtttagtattgggcca
tgtataaatgccggaggaagaattggagaagcatcgctcggtgcaaggttgctttccacc
gatgatgatgatgatgcacattcaatcgcgctaaaactaatagatttgaataatgcaaga
aaaatgctagaaaatgaggctattttggaagccacaacacaagcggaaaattttgcccac
ttaggtgtaaattttataatggtaagtggtaattggcaccagggaataattggtatcatt
gcatcaagactaaaggagcaatttcacttaccaacgatagtaatatctttaaataatgga
ataggaaaagcaagctgcagatcaatttctggggtagatattggtgctgcggttctttct
gcaaaatttaccaacctaatcattgaaggtggtggtcacagtatggcagcaggattttcg
attaaggaagataaaataagtgatctacatgatttctttactgaaagatttgcaaactct
acaaatgacaaaatcataaaagctgatggtatagtaacagctaaagcaataaacttatcc
ctttggaatcaactgcagcgcttagagccatttggagctggcaatcctgaaccgagattc
atcattcaaggagcaaagataagaaagccggaagttataggagttgaccatataaaatgt
tttattgctgacgataatgttatggtcaaagctattgcgtttcgctgtgcaaatactgag
cttggctctgctattatgcagggtaatgttaaagccattttgggtaaaatctctatgaat
tactggaatggcaatgaatttgtgcagtttttaatagaggatgtattgaccattagttga
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