Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP1065
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Entry
WP1065 CDS
T00719
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
wpi
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Brite
KEGG Orthology (KO) [BR:
wpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WP1065 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wpi03021
]
WP1065 (rpoD)
Transcription machinery [BR:
wpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WP1065 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_1
Sigma70_ner
Sigma70_r1_2
Sod_Ni
Vps54
Motif
Other DBs
NCBI-ProteinID:
CAQ55173
LinkDB
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Position
1131692..1133593
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AA seq
633 aa
AA seq
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MMSTINGTEDRKKIIKDLVTKSIRKGGFITFDDINDKLSDENFSTDFIDDTIALLQDSGI
NILESSEDEEEAPSNNDGNKLDDDETSLNTTTTLVQNDDPVRIYLQDMSSVKLLSRADEI
KIAKKIESEKHNMLRAIIETSVAFKIIKTWRDDLSGGTFLLREIINLDAIYNSDFNMVDK
EESEAEDVRDCVNDEEKGNDEKGNESEDISSANLNISVLEMESDLLPKVITALDEIIALT
NEALVLKKNSKDFSNELENLYNQIWSVALQIQFSDAAITRITQKLYEINRLITFEEANLI
TEARKYDIDRESFYNVYDDVLLEHEFSEISFLKINENQSLFTGELKNKFLRFINDSYEYI
ASALSNIKSYVQGDRVQEFKKVIKRIQKHEQEVSQAKQEMIKANLRLVVSIAKKYSKRGL
DLLDLIQEGNIGLMKAVDKFDYKRGYKFSTYGTWWVKQSITRAIPEQSKVVRIPVHMVEI
ISKINKALRKMTHEMGREPTLEELSIELAMPLERIRKVMKIARDPVSLEAPTGKDDSSTF
GDCIEDKRVSKPEDAAILADLRGITTNVLATLTPKEERILRMRFGLGKDGKEHTLEEVGK
IFNVTRERIRQIEAKALRKLKHPSRAKKLRGFF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaactattaatggtacggaagataggaaaaagatcatcaaagatcttgtaacc
aaaagtataagaaagggcggttttatcacttttgatgatataaatgataagttgtcagat
gaaaatttttcaactgattttatagatgatactatagctttattgcaagactctggaatt
aacatactcgaaagtagtgaagatgaggaagaagctccttctaataatgatggtaataag
cttgatgatgatgagacatcgttgaatactactacaactttagtgcaaaacgatgatcca
gtaaggatttatttacaggatatgagctctgtaaagcttttgtcacgagcagatgaaatt
aagatagcaaaaaaaattgaatctgaaaagcataacatgttacgtgcaataattgaaaca
tcagtggcattcaaaataatcaaaacatggcgtgatgatttaagtggtggaactttttta
ctgagagaaattataaatctggatgcaatttataactctgatttcaatatggtagacaaa
gaagaaagtgaagctgaagatgttagagattgtgttaatgatgaggaaaaaggtaatgat
gaaaagggaaatgagagtgaagacataagttcagctaacttaaatatttctgttcttgaa
atggaaagtgatttattgccaaaggttatcacggcattggatgagatcattgctttaaca
aatgaagcattggtattgaaaaaaaattctaaagatttctctaatgagctagaaaattta
tataatcaaatatggtctgtagcattacaaattcagtttagtgatgctgctattaccaga
attacacaaaaactttacgaaataaatagactaatcacgtttgaagaagctaatcttatt
actgaagctagaaagtacgatattgatagagaaagtttttataatgtttatgatgatgtg
cttttagagcacgagtttagtgaaataagttttctcaagattaatgaaaatcaatctctt
tttacaggtgaattaaaaaataaattcttaaggtttataaacgatagctatgagtatata
gctagtgccttaagcaatattaagagttatgtacaaggagatagagttcaggagtttaag
aaggtaatcaagagaatacagaaacatgaacaagaagtctctcaagcaaagcaagaaatg
attaaggctaatttaaggctggtggtttcgattgctaaaaagtattcaaaaagaggcctt
gatctgcttgatttgatacaagaaggtaatattggtcttatgaaggctgtggataagttt
gattacaaacgtgggtataaattttcgacttatggtacttggtgggtaaaacaatcaatc
actagggcaatacctgaacagtctaaagtagttagaataccagtacatatggtggaaatt
atcagtaaaatcaacaaagcattaagaaagatgactcatgaaatgggtagagagcctaca
ttagaggaattgagtatagaattggcgatgccgctagaaagaatacgcaaagttatgaag
atagcaagagatccggtaagtcttgaagctccaacaggaaaggatgatagtagtaccttc
ggtgattgtatagaagataagcgagtttctaaaccagaggatgctgcaatacttgccgac
ttgcgtggtattacgaccaatgttcttgcaactttaacaccaaaagaagaaagaattcta
aggatgcgctttggccttggtaaagatggaaaggagcataccttagaagaagtaggaaaa
atttttaatgttacacgtgaaagaattaggcaaatagaggcaaaagcactacgtaagttg
aaacatccaagccgtgctaaaaaacttagaggtttcttttaa
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