Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP1189
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Entry
WP1189 CDS
T00719
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wpi
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Pathway
wpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WP1189 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wpi03021
]
WP1189 (rpoA)
03400 DNA repair and recombination proteins [BR:
wpi03400
]
WP1189 (rpoA)
Enzymes [BR:
wpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WP1189 (rpoA)
Transcription machinery [BR:
wpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WP1189 (rpoA)
DNA repair and recombination proteins [BR:
wpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WP1189 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CAQ55297
LinkDB
All DBs
Position
1264997..1266064
Genome browser
AA seq
355 aa
AA seq
DB search
MYYSDNVSFCGNLDRLTKPNAIKVISGDSSKKSDIVLEPLESGFALTLGHALRRVMLSSL
RGSAVYGIKIEGVNHEFTSIQGVREDITDIALNMGMLRCKLNNTSNKCLNLSAKGPCQVL
AGMIETDDQCSIVNKDLVICTLGQDVELNITIYIASGKGYLSVNKYKENEFLKSMNEQDL
IGFIPVNALYSPVERVSYRVENSRVGQVTDKDKLILSIETDGTISPSQAVDYAARILQEQ
FQPFISSDMSYKKSQVSLSSGAKDLGYDPVLLRKVDEMELSVRSHNCLKNENITYIGDLV
QKTEVEMLRTANFGRKSLNEIKAILNNSGLSLGMNIPNWPPKDIDELAKQHTDED
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtattatagtgataatgtctctttctgtggaaatttagatagattaactaagcctaat
gcgattaaggtaatatcaggtgattcaagtaaaaaaagtgatatagttctagaacctttg
gaaagtggttttgctttaacgttgggtcatgcattaaggcgtgtaatgttgtcttctctt
cgcggtagtgctgtttatggaataaaaattgaaggcgtgaatcatgaatttacttcgatc
caaggagttagggaagacataactgatatagcattaaatatgggcatgttgagatgtaag
ttaaataacacgtctaataagtgcttaaatttgagcgctaaagggccttgtcaagtatta
gctggaatgatagaaactgatgaccaatgctctattgttaataaagatttggtgatatgt
acactaggtcaagatgtggagcttaacattactatatatattgctagtggaaaaggttat
ctttctgtaaataaatataaagaaaatgaatttttaaagtctatgaatgaacaagattta
attggttttattccagttaatgctttatatagtcctgttgagagggtttcgtatagagta
gagaatagtcgtgttggtcaagttactgataaagataagctgatattgtcaattgaaact
gatggtacaatctctccaagtcaagctgttgactatgctgcaagaatattacaggagcaa
tttcagccttttattagttctgatatgagttataaaaaatcgcaagtttctttgtctagt
ggtgctaaagatttgggctatgatcctgttctattgcgtaaagtagatgaaatggaatta
tctgttagatctcataactgtctgaaaaatgaaaatatcacttatataggtgatcttgtg
caaaagacggaagttgaaatgttaagaactgctaattttggccgaaagtctttgaatgaa
atcaaggcaattttaaataattcaggtttgtctttgggtatgaatataccaaattggccg
cctaaggatatagatgaactggctaaacaacatactgatgaggattag
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