Watersipora subatra (red ripple bryozoan): 137392893
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Entry
137392893 CDS
T11735
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
wsb
Watersipora subatra (red ripple bryozoan)
Pathway
wsb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wsb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137392893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wsb03041
]
137392893
Enzymes [BR:
wsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137392893
Spliceosome [BR:
wsb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137392893
Complex B
137392893
Complex C
U2 SnRNP specific factors
137392893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Nha1_C
Motif
Other DBs
NCBI-GeneID:
137392893
NCBI-ProteinID:
XP_067935351
LinkDB
All DBs
Position
4:complement(41249104..41270346)
Genome browser
AA seq
722 aa
AA seq
DB search
MSWPINKLSTPAPSKKALEQPGFSLNIQHGHQQHSGYYGTNIGKKRYKEENEYFEDDEED
GPAAPPDSDLEYQPAPDSPGAKGSGNESDNDSVDPLDAYMAGIDEEVKEEQKKPSKEKKK
ENIRDDIEGEDVQEAFYRYMEENPMAGVYLEDDEIVEYDEDGNVIYHKNKVIDPLPPVDH
HDIDYEKFSKNFLEEHSDVACLTEQQVNSLRSKLGIRVSGIQPPKPVSSFGHLGFDEKMM
NAIIKAGYTTPTPIQAQGVPVALAGRDIIGIAKTGSGKTAAFLWPMILHILDQREQKPGD
GPIGLICAPTRELSQQIYNEAKKFAKNYGLHVVCAYGGGSMYEQQKACAECPEIIVCTPG
RLIDLVKKKSTNLQRVTFLVFDEADRMFDMGFEAQVRSIANHVRPDRQTLLFSATFKRKV
ERLARDILSDPIRVVQGDVGEANEDVTQHVLVFKQRDNKWPWLAQNLVQFTSTGAVLIFV
TRKDNSEDLANKLKQIDVKAGLLHGDMSQGSRNEIITKFKKKEFPVLVATDVAARGLDIP
SIKTVINYDVARDIDTHTHRVGRTGRAGEKGTAYTLLTAAKDIDFSAHLVRNLEGANQRV
PEDVIELANKNLWFANTRFKQGKAKRLGGGGLGFKTRQRPGLGSSEGSSFGAGSSGKFIS
TNDYKPTNRLDTMRAHFKSQFQSNFISAATDIGKGPAPPPSRPEPAVPPPENKKRRKQRW
DV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcctataaacaaactttctacacctgctcctagtaagaaggcgttggagcaa
cctggattttcattaaatatacaacatgggcaccagcagcactcaggttactatggcaca
aacattggtaaaaagagatacaaggaagagaatgagtattttgaggatgatgaagaggat
gggccagctgcgccacctgacagtgatttggaataccagccagcgcctgacagtcccggt
gccaaaggctccgggaatgaatctgataatgactccgtggacccattagatgcttacatg
gcaggaatcgatgaagaagtcaaagaagaacagaaaaaaccatcgaaagagaaaaagaaa
gagaatattcgagatgacatagaaggggaagatgtacaagaggcattctataggtatatg
gaagagaatccaatggctggagtctacttggaagatgatgagattgtagagtacgatgaa
gacggtaatgtaatataccacaaaaataaagtcatcgacccgctgcctcctgtcgaccac
catgatattgactatgaaaaatttagcaagaactttttggaagagcacagcgacgttgcg
tgtctcactgagcagcaggtgaactcattgaggagtaagctgggcatacgggtctcagga
attcaaccacccaaacctgtgtctagtttcggccaccttggatttgatgagaagatgatg
aacgcaatcataaaagcagggtacacaactccgacaccaattcaggctcagggtgtgccc
gtggctctagctggcagagacattatcggtatagcgaagactggctctggaaagacagca
gcgttcctttggcccatgattctgcacatcttggatcagagagagcagaagccaggagat
gggcccattggtttgatatgtgctcccacccgtgaactctcacagcagatatacaacgag
gcaaagaagtttgctaagaactatggcttgcatgttgtgtgcgcctacggaggaggcagt
atgtatgaacaacagaaggcatgcgctgagtgtccagagattattgtgtgcacaccaggt
agacttattgatctggtgaaaaagaagtcaactaacttgcaacgcgtgacgtttcttgtg
tttgatgaggcagaccgaatgtttgacatgggctttgaagcccaggttcgatcaatcgcc
aaccatgttcgtcctgaccgccagactctcctattcagtgcgacattcaagcgtaaggtg
gagaggctggcgcgagatattctctcagaccctattcgggtcgtacaaggagacgtgggt
gaggcaaatgaagatgtaactcagcatgtcttagtcttcaaacagagagataacaaatgg
ccctggttggctcagaaccttgtacaattcacatctacaggagccgttctcatatttgtt
acaaggaaagacaacagcgaagaccttgccaacaaattgaagcaaattgatgtaaaagct
ggtctgttgcatggagatatgagtcaaggtagtcgaaatgaaattattacaaaatttaaa
aagaaggaattccctgtccttgttgcgacagacgtagcagccagaggtctagatattccg
tcaatcaagacagtgataaactacgatgtagcccgagatatagacactcacacgcataga
gtcgggcgtacgggtcgtgccggagaaaagggaactgcttacactcttctcactgctgcc
aaggatattgacttctccgctcatcttgtcaggaacctggaaggtgctaatcagagagtt
cccgaagatgtcattgagttggcaaataagaatctatggtttgccaacacaaggtttaag
caaggaaaagccaagcggcttggaggtggaggacttggatttaaaacgcgtcagcgtcca
ggactcggcagttctgagggctcgtcctttggtgctggaagttctggaaaattcatctct
acaaatgattacaaaccaacaaacagactggatacaatgagagcacatttcaagtcacaa
tttcagtccaacttcatctctgctgctactgatattggcaaagggcccgcaccacctcca
tcacggcctgagccagccgttcctccacccgaaaataagaaaaggagaaagcagagatgg
gatgtttga
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