Watersipora subatra (red ripple bryozoan): 137395334
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Entry
137395334 CDS
T11735
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
wsb Watersipora subatra (red ripple bryozoan)
Pathway
wsb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wsb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137395334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wsb03041
]
137395334
03009 Ribosome biogenesis [BR:
wsb03009
]
137395334
Enzymes [BR:
wsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137395334
Spliceosome [BR:
wsb03041
]
Complex A
U2 snRNP components
U2 related factors
137395334
Complex B
137395334
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
137395334
Ribosome biogenesis [BR:
wsb03009
]
Eukaryotic type
90S particles
Helicases
137395334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
nSTAND_NTPase5
Flavi_DEAD
nSTAND3
Cas3-like_C_2
AAA_29
AAA_25
NACHT
Motif
Other DBs
NCBI-GeneID:
137395334
NCBI-ProteinID:
XP_067938322
LinkDB
All DBs
Position
1:19600049..19621286
Genome browser
AA seq
736 aa
AA seq
DB search
MPRARIDVGETRGRREEKKRSRSRSPPGPPMPSQGATVPMPAPGKVTLTLNPFTGLPFTP
KYNELFKRRSQLPVWEYKHKFTNLMNTTQVFVLVGETGSGKTTQIPQWCVDWVRMQTPKR
GVACTQPRRVAAMSVAQRVAEEMDVGLGQQVGYNIRFEDCTSSNTLLKYMTDGMLLREAM
SDPLLENYGVIMLDEAHERTLATDILMGLLKEVVKQRADLKLIVMSATLDAGKFQTYFDG
CPLLTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEEAGDVLLFLTGQEEIEEAC
KRLQREVDNLGSEIGEMMCVPLYSTLPPALQQRIFEPAPASRPNGAVGRKCVISTNIAET
SLTIDGVVYVIDPGFAKQKVYNPRIRVESLLVSAISKASAQQRAGRAGRTRPGKCFRLYT
EKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AAIDDNGELTELGSMMAEFPLDPQLAKMVIASCDFTCSNEILSITAMLSVPQCFVRPNEA
KKQADEAKMRFAHIDGDHLTLLNVYHAFKQNHDDPQWCYDNFINFRSLKSADNVRNQLAR
IMDRFNLRRTSTDFTSREYYINIRKALVSGFFMQVAHLERTGHYLTVKDNQIVQLHPSTC
LDHKPEWVLYNEFVLTTKNYIRTVTDIKAEWLIKIAPQYYDMGNFPQCEAKRVLERIIAK
IETKKFADSHGARASY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggctagaatagacgttggcgaaacccggggacgacgggaagagaaaaagcga
tcaagatcccgcagtcctccgggtccaccgatgccatctcagggtgccactgtgcccatg
cctgctcctggcaaagtgactctcacgctcaatccattcacaggcttaccattcacaccc
aagtacaatgaactctttaagagaagaagccaactacctgtttgggagtacaagcacaag
tttaccaacttaatgaacaccactcaggtgtttgtattggtaggagagacaggctctggc
aaaactactcagataccacaatggtgtgttgactgggttcgtatgcagacgccgaagaga
ggggtagcttgtacccagccccgtagagtggcagccatgtcggtggctcagagagtggca
gaggaaatggatgtgggactgggccagcaagtcggttacaacatccgatttgaggattgt
acttcatctaacacccttctcaagtatatgacagacggtatgttgttgcgtgaagctatg
tcagaccctcttctagaaaattacggtgtgataatgttggatgaagctcacgagcgaacc
ctggctacagacattctcatggggttgcttaaagaggtggtgaaacagagggctgatctc
aagctcattgtcatgagtgcaacactcgacgctggaaaatttcagacatacttcgatggg
tgccctctgctaactgtgcctggcagaacacaccctgttgagatattctatacacctgaa
ccagaacgtgattacttggaggctgcaatcagaactgttgttcagatacacatgtgtgag
gaagaggcgggtgatgtactgctctttctcactggccaagaggaaatagaggaggcgtgc
aaaaggcttcagagagaggtagataaccttggcagtgaaataggagagatgatgtgtgta
ccgctctactcgactcttcctcctgcgcttcaacagcgcatttttgaaccagcgccagcc
agccgtccaaacggagccgttggaaggaaatgtgtcatttctacaaatatcgcagagact
tcacttaccatagatggtgtcgtctacgtcattgatcctggctttgctaaacaaaaggtg
tataaccctcgtattcgcgttgagtctctcctggtctcagctattagtaaggcttcagcg
cagcagagagctggccgggctggtcgtacgaggcctggtaaatgcttcagactctataca
gaaaaggcatataaaaatgagatgcaagataacacttatcctgagatactgagatcaaac
ctgggcagtgtcgtcttgcagctcaagaagctaggtattgatgacttggtgcactttgac
ttcatggatccaccagcacctgagacccttatgagagcccttgagctactcaactacctc
gcagccatagatgacaatggagaactaacggagctaggcagtatgatggccgagttccct
cttgacccacagttggctaagatggtcattgccagttgtgacttcacttgttcaaatgag
atcctttctatcacagccatgctctccgtgccccagtgtttcgtgagaccaaacgaagcc
aagaaacaagcggatgaggccaagatgagattcgcacacatagatggtgatcatctgacc
ttgctaaatgtctaccacgccttcaagcaaaatcatgacgatccacagtggtgttacgac
aacttcatcaactttcgatctttgaaaagtgcagataatgtgagaaaccagttggctcgc
atcatggacagatttaacctgcgtcgcactagtacagacttcacaagccgcgagtattat
atcaacataaggaaagctctagtatctggcttttttatgcaggttgctcatcttgaaaga
accggtcactacctgactgttaaggacaaccagatagtacagctgcacccttcgacttgt
cttgatcacaaaccagagtgggtcctctacaacgaatttgtcctcaccaccaaaaactac
attcgcacagtgacagacataaaggcggagtggctaataaagattgccccgcagtactat
gacatgggaaactttccacagtgtgaagctaaacgagtcttagagagaatcattgccaag
atagaaactaagaaatttgcagactcgcatggtgcccgtgcttcttactaa
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