Watersipora subatra (red ripple bryozoan): 137398964
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Entry
137398964 CDS
T11735
Name
(RefSeq) collagen alpha-1(V) chain-like
Organism
wsb Watersipora subatra (red ripple bryozoan)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
137398964
NCBI-ProteinID:
XP_067941230
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All DBs
Position
6:42499037..42529246
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AA seq
1627 aa
AA seq
DB search
MRRPDATASPSLLFLSLTALLLLTVTAQDSPFSEYDYNYGTADLRWIAENSQAIESVPGS
CGRVSDSYDDMAMRLTEDSKINLPTKDAFPDGFSRDFSILLTFRGDITTEVPIFNVASGS
TAETALAVKVSPNSVRFIYSDVNNRPGPKNAIVWNNINFSGNKWRRISLSIKGNSVTLLD
ECKEVESKTLDRSDGPLDIEGVIFIGKEINNDAAFRGEIQDVMIVGDPSTAYDMCLYYRP
DCQGAPAANQFPTGPVDNSGGATRMEYIPGEPGPPGSRGAPGPMGPKGNSGPAGRDGMPG
MDGLPGPAGHVIVIPMSQAASDSKGPSGAAQIARNALMQQMNSMRGPPGPQGLTGQPGPV
GPPGSIGAKGESGSPGEQGMPGMRGNVGQPGPPGRRGKAGSQGERGERGVPGPKGDSGYP
GQYGMPGAKGDQGFPGEQGPVGQEGLRGVTGDQGPPGPDGSIGDPGPRGFIGPRGSPGPA
GSPGAPGVEGSPGPKGDQGPFGPNGPPGAAGASGPDGAPGPQGSLGPPGPPGSDGKPGMS
GLPGVDGVAGFPGQKGSNGQKGERGPEGPRGMPGPAGLQGNKGTSGERGPPGQKGELGIV
GMDGPVGDPGMNGDRGQKGDSGPYGISGDSGPKGDRGDVGEPGPSGPVGEKGPMGMPGFS
GYPGPPGQKGSRGQAGRKGKPGEKGSAGPRGQMGDRGSPGPLGQRGERGNPGPQGPIGMQ
GNQGAPGPSGEPGPQGAPGPEGQPGFQGPMGPPGSSGNDGMPGAMGERGAPGLPGEPGQP
GPVGVVGQAGPTGPIGPAGERGDPGVPGPPGPAGFPGGDGRAGFPGPPGPMGPQGQGLGV
PGAPGPVGSKGDAGPPGKDGLPGPAGRRGAAGERGFRGIQGPMGPTGDVGVPGQPGPRGN
LGAMGPKGARGSDGPSGKDGPAGAQGPHGMPGPQGISGPPGEEGAPGPQGLAGPKGDKGA
EGSQGPPGLRGPLGPRGAPGSQGPAGERGERGDQGMNGAKGSEGPPGAPGLPGIMGKQGM
PGAPGPKGEAGDKGKTGAPGPVGSAGAIGQTGPRGEPGLPGPDGPPGLRGYAGRRGEAGQ
PGEAGEPGKPGAPGSQVGPPGPQGPSGTTGPAGDKGAPGEPGPKGPIGLTGAPGQAGPAG
LMGAKGERGKDGKNGKDGPQGPQGPEGSIGEPGAPGPRGTPGNDGNPGIVGPPGPSGEPG
EQGPQGLQGMQGPPGGPGNAGLKGVQGPAGQPGSAGDPGPQGMAGKPGDTGPIGDPGTRG
VKGQTGEKGDKGDTGSLGPPGPPGDLGGKGQRGPAGLPGREGVKGSPGPIGAPGAPGPDG
PAGVAGPIGAPGPKGDAGRDGPPGAPGPAGSPGEPAGFNSAIPSSFVDGTLKRRKRSFRQ
EMVADEPAQSVFDMPPTPTLGHVIEKIFQEIDDIKEEIDSVRYPNGARETPARSCKDLYL
AHPEFKDGWYWIDPNLGVTKDAIQVWCNMSAEGETCVYPKKGHDMVLPRNWRSDSSSAWF
SELKGGFQVQYADESQVSFLRLIYTAASQKMTYFCSNSVAYKDAAADNNDKALTLLGHND
FEFGNRSLRKKHVLLDGCANRPTSGFTIFQIQTNKLQQLPIVDILVKDFGRPNQKFGFEM
GPICFGY
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggcccgacgcaacggcctcgccgtctcttctctttttgtctttgacagctctg
ctgctgcttactgttactgctcaagactcaccattctctgaatacgactacaactatggc
acagcagacctcagatggattgcagaaaactctcaagcaatcgagagtgtaccaggttca
tgcggtcgagtgagcgactcatacgatgatatggccatgaggctaacagaagactctaaa
ataaatctaccaacaaaggatgcattccctgacggtttcagcagggacttctctattctc
ctcacattcagaggtgacatcactacagaagtgcctatcttcaatgttgctagcggcagc
actgcagaaacggctcttgctgtaaaggtttctccgaatagtgttcggtttatttattcc
gatgtcaacaatcgtcctgggcctaaaaatgccatcgtctggaacaacatcaacttctca
ggcaacaagtggagacgaatctctctgagcatcaaaggaaactcagtcacattactcgac
gagtgcaaagaggtggagagcaaaactctagacaggtccgatggtcctctagacatcgag
ggtgtcatcttcatcggcaaggagataaacaacgatgcagcttttaggggagaaatccaa
gatgtcatgatcgttggtgacccatcgacagcctatgacatgtgcctctactacagacca
gactgtcaaggagcacctgcagccaaccaattccctacaggcccagtggataactctggt
ggagcaacgagaatggaatatatacctggagagcctggaccaccaggtagccgtggagct
ccaggaccaatgggtcccaagggtaacagtggacctgctggtcgagatggcatgcctggt
atggatggtttgcctggacccgctggccatgtgattgtcattccaatgtcacaagctgca
agtgactctaaaggtcctagcggagcagcacagatagctaggaatgccctcatgcaacag
atgaactccatgagaggcccacctggtcctcaaggtctcactggacaacccggacctgtt
ggaccacctggttcaattggagctaagggcgaatcaggcagtcctggagaacagggtatg
cctggcatgcgaggaaatgtaggacagcctggacctccaggacgaagaggaaaagccgga
tcacaaggagaacgtggagaacgtggtgtgcctggtcccaaaggagactctggctaccca
ggacagtatggtatgcccggtgcgaagggagaccagggattccctggtgaacaaggaccc
gtgggacaggaaggtttgagaggtgtaactggagatcaaggtccaccaggaccagatggt
tccattggagaccctggacccagaggatttattggaccaagaggatcacctggacctgct
ggttcaccaggagcacctggtgtggagggttcacctggcccaaaaggagatcagggacct
tttggccccaatggtcctcctggcgccgctggtgcttctggacccgatggagcacctgga
cctcagggaagccttggcccacctggtccccctggaagtgacggtaagcctggcatgtct
gggttgcctggagtagatggtgttgctggtttccccggacaaaagggatctaatgggcaa
aagggagagcgagggcctgagggaccgcgaggtatgcctggacccgctggtcttcaagga
aacaaaggcacatcgggtgagcgcggtcctcccggacagaaaggagagctcggtattgtg
ggcatggatggtccagtcggagaccctggtatgaatggagacagaggacaaaagggtgac
agcggaccttacggtatctctggagacagcggacctaaaggagacagaggagatgttgga
gagcctggtccatctggtccagttggagagaagggtccaatgggcatgcctggattttca
ggatatcctggcccaccaggtcagaagggctccagaggacaggctggtcgcaaaggaaag
ccaggagagaagggttcagctggacccagaggacagatgggtgatagaggctctcctggt
cctcttggacagcgtggcgagagaggcaaccctggtccacaaggtccaatcggaatgcaa
ggtaaccaaggagctcccggacctagcggtgaaccaggaccccaaggagcccctggaccc
gaaggacagcccggattccaaggaccaatgggtccacctggatcctcaggaaatgatggc
atgccaggagctatgggagagagaggtgcccctggattaccaggtgagcccggacaacct
ggcccagttggtgtagtcggtcaagcaggtcccacaggacctatcggaccagctggtgag
agaggtgatcctggagtacccggaccaccaggtcctgctggtttccccggcggtgatggc
agagctggattccctggacctcctggcccaatgggacctcaagggcaaggactgggtgta
cctggtgctcctggacctgttggtagtaagggagatgccggtcctcctggaaaagatgga
ttacctggacctgctggtcgacgtggagctgcaggagaaagagggttccgtggaatacaa
ggaccgatgggtccaaccggagatgttggtgttccgggacaacctggacctcgaggaaac
ctcggagctatgggacccaaaggtgcccgtggttctgatggaccttctggtaaagatggt
cccgctggagcacaaggacctcatggtatgcctggacctcagggaatatctggacctccc
ggagaagaaggtgctcctggacctcaaggattggctggtcccaagggtgacaaaggtgct
gaaggctctcaaggaccacctggtctgagaggaccattgggaccacgtggtgctcctggt
tctcagggacccgctggagagagaggcgagcgtggagaccaaggtatgaatggagctaag
ggaagcgaaggaccacctggcgcacctggtctgccaggaattatgggcaaacagggtatg
cctggagctccaggacccaaaggagaagctggtgataagggtaaaactggagctccagga
ccagtgggatctgctggtgctattggacaaactggaccacgaggagagccaggcttgcct
ggacctgatggccctcctggtttaagaggatacgctggaagaaggggggaggccggtcag
cctggagaggctggtgagcccggaaaacctggagctcctggatctcaagttggaccacct
ggaccgcaaggtccatctggcactaccggacctgctggagacaagggtgcacctggagag
ccaggaccaaagggcccaattggtctgacaggagcacctggtcaagctggacccgctggc
ttaatgggagccaagggagaacgtgggaaggatggaaagaatggaaaagacggaccacaa
ggacctcagggaccagaaggaagtattggtgagcctggtgcaccaggaccaagaggcaca
cctggaaatgacggtaaccccggtattgttggaccacctggaccctctggagaacctgga
gaacaaggacctcaaggtttgcaaggtatgcagggacctcccggtggaccaggaaatgcc
ggtctcaagggagtccaaggaccagccggacagccaggatctgcaggtgatcctggacct
caaggaatggctggcaaaccaggagacactggtcccatcggtgaccctggtacacgagga
gtaaagggacaaactggagagaagggagacaagggtgataccggttcgcttggaccacct
ggtccacccggagaccttggaggcaaaggacagcgtggacctgctggtctgcctggcaga
gaaggagtgaaaggctcaccaggtcctatcggagcaccaggcgctccagggcccgatgga
ccagctggtgttgccggaccaattggtgcaccaggaccaaagggagatgcaggtagagac
ggacctccaggagcacctggtccagcgggttcaccaggagagcctgctggattcaacagc
gccattcctagctcatttgttgatggaactctgaagagaagaaaacgctccttcagacag
gaaatggttgcggacgagcccgcccaatctgtatttgatatgccaccaactccaacctta
ggacatgttattgaaaagatattccaagaaatagatgacatcaaggaagagatagacagt
gtcaggtaccccaacggagctcgtgagactccagccagatcatgcaaagatctttacctt
gcacacccagagtttaaggatggatggtactggatagatcctaatcttggggtaactaag
gacgccatacaggtctggtgcaacatgtcagctgaaggagaaacatgtgtctatcctaaa
aagggtcatgatatggttctgccaagaaactggaggtctgacagctccagcgcctggttt
tctgaacttaaaggtggattccaggttcaatacgctgacgagtcacaagtatcctttctt
cgacttatatacacagcggcgtcacagaagatgacctatttctgttccaactcggtggcg
tacaaagatgctgccgctgataacaatgacaaggcattaacgctcctcggccacaatgac
tttgagtttggaaatagatcgctaaggaagaaacatgtgttactagatggatgtgcgaac
cgaccgacaagcggtttcaccatattccagattcaaaccaacaagctccagcagctccct
atagtcgacatccttgtcaaagactttggccgaccaaaccagaagttcggctttgaaatg
ggacctatatgttttggctactaa
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