Watersipora subatra (red ripple bryozoan): 137409002
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Entry
137409002 CDS
T11735
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
wsb
Watersipora subatra (red ripple bryozoan)
Pathway
wsb03030
DNA replication
wsb03410
Base excision repair
wsb03420
Nucleotide excision repair
wsb03430
Mismatch repair
wsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137409002
03410 Base excision repair
137409002
03420 Nucleotide excision repair
137409002
03430 Mismatch repair
137409002
03440 Homologous recombination
137409002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wsb03032
]
137409002
03400 DNA repair and recombination proteins [BR:
wsb03400
]
137409002
Enzymes [BR:
wsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
137409002
DNA replication proteins [BR:
wsb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
137409002
DNA repair and recombination proteins [BR:
wsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
137409002
MMR (mismatch excision repair)
DNA polymerase delta complex
137409002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
137409002
NCBI-ProteinID:
XP_067951635
LinkDB
All DBs
Position
1:21911916..21996112
Genome browser
AA seq
1086 aa
AA seq
DB search
MAGNKRPGSSQGSQSSKRARDDAEVEEDPSAFELELALLEEEEMEFQASQGVGPDSEPAA
SSSSSRPALKKPIDEKEDSIIFQQIDIDYYVGHHRAGMPGLQSGSVPIVRMFGVTMEGHS
VMAHVHGFHPHFYVKAPPNFVSQDCWDFKSCLNAKVIADMRSNKDNITHAVLAVDVLMKE
SIYGYHGNKKEQFLKITLALPKFVAPAKRLLERDFAFGSYPGHEYQAYESNVEFEVRFMV
DMNVTGCNWIEIPAKKYFLRTNKECRCQIELDVSVEEFISHPAEGEWSICAPFRILSFDI
ECAGRKGIFPEPDKDPVIQIANMVTNQGEKTPFIRNVFTLDTCAPIIGSKVYSFQSEKEL
LKSWAAFIREADPDIITGYNIQNFDLPFLLNRASHLKVEHFAFLGRVKNNCSTIREREIA
SKQMGRRENKIINIEGRVQFDLLQVLLRDYKLRSYSLNAVSYHFLGEQKEDVHHAIITDL
QNGTEQTRRRLAVYCMKDAILPLRLLDKLMCIINYMEMARVTGVPLNYLLTRGQQIKVIS
QLLRKAKTQDLLIPVMRTQTGEEYTGATVIEPKRGYYNTPIATLDFASLYPSIILAHNLC
YTTLLPPGAIKRLGLTEDDYNKTPSGNYFVKPALRNGLLPEVLNDLLTARKKAKADLKLE
TDPFKKKVLDGRQFALKLSANSVYGFTGAQVGRLPCLEISQSTTAYGRKMIDFTAETVTN
QYTVQNGYKADAKVIYGDTDSVMVKFGVETVAEAMELGKEAAEFISSKFVKPIKLEFEKV
YFPYLLINKKRYAGLYFTKPDKHDKLDCKGIETVRRDNCQLVANLINQCLKVILIDRNPE
AAADHAKQVISDLLCNRVDISQLIITKELTKTDGEYHAKQAHVELANRMKKRDAGSAPQL
GDRVPYVIVAKGKGSAAYEKSEDPIYVLDNNVPIDTKYYLDQQISKPLLRIFEPIFGEKK
AESVLLHGDHTRVKTVIMSKVGGLAAFTKKRLTCIGCRAALDNKDGSGALCTYCQAKQSE
IYQKEVATLQHLEDRFSRLWTQCQRCSGSLHEEVLCTSRDCPIFYQRKKVQKDLGSQQEV
IERFVW
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaacaaacggccaggctcttctcagggtagtcagtcttccaagagagcaagg
gatgatgctgaggttgaagaagacccttctgcttttgagttggagttggcactccttgaa
gaggaagaaatggaattccaggcatctcaaggcgtaggcccagattctgagccagctgca
tcatcgtcctcatcacggcctgctctcaaaaagcctatagacgaaaaagaagactccata
atctttcaacagatcgatattgactactacgtaggccaccatcgagcggggatgcctggt
ctacagtcaggctccgttcctatcgtaagaatgtttggagtgacaatggaggggcacagt
gtgatggcacatgtacacggatttcatccacacttctatgtcaaggcaccacccaatttc
gtctcacaggactgctgggacttcaagagctgtctgaatgccaaggttatagctgacatg
aggtctaacaaagataacatcacacatgccgttctagcagtcgatgtgctcatgaaggag
agtatttatggatatcatggaaacaaaaaggaacagtttctcaagataactttagctctg
cccaagtttgtggctcccgcgaaacggttgcttgaacgtgactttgctttcggaagttac
cctggccatgaatatcaggcatacgagtcaaatgtcgaatttgaagtcaggttcatggtt
gacatgaatgtaactggctgcaactggattgagattccagcaaaaaaatactttctccgt
acaaacaaagaatgtcgctgtcagatcgaattggatgtttctgtggaagaattcatatct
catccagctgaaggagaatggtccatatgtgctcctttcagaatcctcagtttcgatatc
gaatgcgccggccgtaaaggtatatttcctgagcctgacaaagatcctgtcatacagata
gcgaatatggtgactaatcaaggagaaaaaactccctttataagaaatgtttttaccctt
gatacgtgtgcgcccatcattggttctaaggtctattcttttcaatcggagaaagagctt
ctcaagagttgggcagcgtttatacgcgaggcagaccctgacataatcacaggctacaac
atacagaactttgacttgccctttctgcttaacagagccagtcatttgaaggtagaacat
tttgcatttctgggtcgagttaagaacaactgttccaccatacgtgaacgagagatagct
tcgaagcagatgggtagaagagagaacaaaatcataaatattgaaggaagagtacaattc
gatctactacaggtcctgttgagagactacaagctccgcagctattctctaaatgctgtc
tcctaccacttcttgggtgaacagaaggaggatgtccaccacgccatcatcactgatcta
cagaacggaacggaacagacgcgtcggagactggctgtttattgtatgaaggatgctatc
ttgcctctgaggctactagacaaactcatgtgtataataaactacatggagatggcccga
gtaactggtgtgcctctcaactatcttctcacccgtggccaacaaattaaagttatatcg
cagctcctcaggaaggccaagactcaagatctcctaatacccgtgatgcgaacacagacg
ggtgaagagtacacaggtgccacagtcatcgaacctaaaagagggtactacaacacaccc
atcgcaactctcgattttgcatcgctgtatccttcaataattctggcacataatttgtgt
tacacaactctactaccacctggagctatcaaacgattgggtctcaccgaagatgactat
aacaaaacgccctctggcaactacttcgtcaaaccagcattgaggaatggcttgttgcca
gaggttctgaatgaccttctcaccgcaaggaaaaaagcgaaagctgacttgaaactggaa
acagacccgtttaagaagaaggtccttgatgggcggcaattcgcgctcaagctgagtgca
aactctgtatacggttttactggagcacaagttggtcgcttaccatgtcttgagatatcg
cagagcacaacagcctatggcagaaagatgattgacttcactgctgagactgtaacaaat
cagtacaccgtgcagaatggatacaaggctgatgccaaggtaatctatggggatacagac
tccgttatggtgaagtttggagtagagacagtcgctgaggccatggaacttggcaaagaa
gctgctgaattcatttcaagcaaattcgtgaaaccaatcaagcttgagtttgagaaggtt
tactttccatacttgcttatcaacaaaaagagatatgcaggcttgtacttcactaaacca
gacaaacatgacaaactcgattgcaagggaatagaaacagtgaggcgtgacaattgccaa
cttgttgcgaatctcattaaccagtgtctgaaagtgatactgatagataggaaccctgag
gcagcggctgaccatgcgaagcaggttatttccgacttactttgcaaccgggttgacatc
tctcaactcatcattaccaaggagttgaccaaaacggatggcgagtaccatgccaagcag
gcacatgtagagcttgccaatagaatgaagaaaagagacgcgggcagtgcgcctcagtta
ggtgacagagtgccctatgttatagtagccaaaggcaaagggtctgcagcttatgaaaaa
tccgaggatcccatctatgtgctggataacaacgtgccaattgataccaagtactactta
gaccagcagatctccaaacctctcttaagaatcttcgaaccgatattcggagaaaagaaa
gccgagtctgtacttttacatggagatcacaccagagtgaaaactgtcatcatgtcaaag
gtcggtggtctggcagcctttactaaaaaaaggctgacatgtattggatgcagggctgct
ctggataacaaagatgggtcaggggctctgtgcacttattgtcaggcgaaacagtcggag
atatatcagaaagaagtggctacgctgcaacaccttgaggataggttttctagactatgg
acccaatgtcagagatgttctggcagtctgcacgaagaagttctctgcacaagtcgagac
tgtcctatcttctaccaaaggaaaaaggtgcaaaaagatctaggcagccagcaagaagtg
atcgagcgatttgtttggtaa
DBGET
integrated database retrieval system
