Wallemia mellicola: WALSEDRAFT_17366
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Entry
WALSEDRAFT_17366 CDS
T03142
Name
(RefSeq) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
wse
Wallemia mellicola
Pathway
wse03030
DNA replication
wse03410
Base excision repair
wse03420
Nucleotide excision repair
wse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WALSEDRAFT_17366
03410 Base excision repair
WALSEDRAFT_17366
03420 Nucleotide excision repair
WALSEDRAFT_17366
03430 Mismatch repair
WALSEDRAFT_17366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wse03032
]
WALSEDRAFT_17366
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_17366
DNA replication proteins [BR:
wse03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
WALSEDRAFT_17366
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
WALSEDRAFT_17366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_30
AAA_18
AAA_16
Viral_helicase1
AAA_33
RNA_helicase
AAA_22
Zeta_toxin
AAA_14
RuvB_N
Motif
Other DBs
NCBI-GeneID:
18470730
NCBI-ProteinID:
XP_006957485
JGI:
Walse1_17366
UniProt:
I4YEG6
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MPKKPAPSKKSFNYKDYLQRTGPENLGSKEIPQGSPNCLNGLTLVFTGELDNIGRDSAVE
AAKRYGAKVTAAPSGRTSYVILGREPGPKKLQIIKEKGLKTLDENGFCQLIANSNGDLNS
NSLSKLKKEEEKIKKDAKELERIEQDKSSQLKSTSKALLITFRSSISPNSQLWTVKYSPN
QLKDICGNKGQVEKIVNWLKDWQNHLRNGFPSDNSKSDIKGKKALLVHGAPGIGKTTAAH
LAAKSAGYSPLELNASDVRSKKLIESTTNIDNTSIDTFFGNNNNDAINTNVTHSTCLIFD
ECDGMSAGDRGGIGAMNALIKKTRIPIICICNDKSNPKMRPFQNTCGDILFRRPEASQIR
SRIMSILHKEKMKLDSNVVDQLISGSQSDIRQVINMISTWKLLSNTMNYDQGKELVQDNQ
KFSIQTPWTVMSNLFSPHMFGPTNQKPLAAKADYYFHDHSLIPLFVQENYVKCNPVKARD
SDHNRSEFNRIKCLSDAADAISDGDLVDSMIHGSQQQWSLMPIHAIHSTVRPASFMYGGF
KSGYGRDTISFPAWLGQYSKTNKYNRALGDIQARMRLKISGEANEIRQYYYPTLWPSLYK
PLIETNVHYEKVIGLLDEYFLSKDEFDIMSELGLDRLSIDNTMKLIPTKNKSAFTRHYNN
RDHPIPFSKGQVVKASAAQIKTEKPDHEDVYDDDDVVVDLKEDDENENEDGDDVLDDKLI
KQPKKSSAAKTSTRGRTTTTSKRGRGRGSTTKK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaaacctgcaccttctaaaaaatctttcaattataaggattaccttcagcgt
accggtccagaaaacctcggttcgaaagagatacctcaaggttcaccaaattgtctaaat
ggtttaactttggttttcacaggtgaattagacaatattggtcgtgactctgccgttgaa
gctgctaaaagatatggagcaaaagttactgcagctccttcaggaagaacttcttacgtc
attttaggtagagaacctggtccaaagaagttacaaatcataaaagaaaaaggcttgaaa
actctcgatgaaaatggcttttgtcaattaattgctaatagtaatggcgacctcaattca
aactccctatcaaaattaaagaaagaggaagagaagataaaaaaggacgcgaaagaatta
gagagaattgaacaggacaaatcgtctcagctaaagtctacttccaaagctttattgatt
accttcaggtcatctatttcaccaaattcccaactttggacagtcaaatactctcccaat
caattaaaagatatttgtggcaataaaggtcaagttgaaaagattgtcaattggcttaaa
gactggcaaaatcatttaagaaatgggtttccatcagataactctaaatctgatatcaaa
ggtaaaaaggctttactcgtacatggtgctcctggtattggtaagactacagcagcacat
ttagccgctaaatcagctggctattcccctcttgaattaaatgctagtgatgttagaagc
aaaaagttaatcgaatcaactactaatattgataacacttcgattgatactttctttgga
aataataataatgatgcaattaataccaatgtcactcatagtacttgcttaattttcgat
gaatgtgacggtatgtcagcaggtgatagaggtggaataggtgcaatgaatgctttgatt
aaaaagaccagaatacctattatttgtatctgtaacgacaaatcaaacccaaagatgaga
ccttttcaaaacacatgtggagacattttgtttagaagaccagaagctagtcaaatcaga
tcacgtattatgtctatacttcataaagaaaaaatgaaattagattcaaatgtcgttgat
caacttattagtggttcacaatctgatatcaggcaagtcataaatatgatttccacttgg
aaattattatctaataccatgaattatgatcaaggcaaagaattggttcaagataatcag
aaattttcaatacaaacaccttggaccgttatgtcgaatctttttagtccgcatatgttt
ggtcctactaatcaaaagccattggcagccaaagcagattattactttcatgaccatagt
ttaatcccactctttgttcaggaaaattacgttaaatgtaatcctgttaaggccagagat
tccgatcataacaggtcagaattcaaccgtattaaatgtcttagcgatgcggcagatgca
atttcagatggtgatctcgttgattccatgatacatgggtcacaacaacaatggagccta
atgcctatccatgccatccattcaacggttaggcctgcttcgttcatgtatggcggtttc
aaatctggttatggacgtgacacaattagtttccctgcatggctcggtcaatattcgaag
acaaataagtataatagagctttgggagatattcaagctagaatgaggcttaaaattagt
ggggaagccaatgagattagacagtattattacccaactttatggcctagtttgtacaag
ccattgattgaaacgaatgtacattatgaaaaggttataggtttattggatgaatatttt
ctctctaaagacgagtttgatattatgtctgagctcggtcttgatcgactcagtattgac
aacacaatgaaattgatacctacaaaaaataagtctgcattcacgagacattacaacaat
agggaccatccaattccattttctaagggccaagtagtaaaagcatctgctgcacagatt
aaaactgagaaacctgatcatgaagatgtttatgatgatgatgatgtagttgttgatctt
aaagaagatgatgaaaatgaaaatgaagatggtgacgatgtacttgatgacaaattaatc
aagcagccaaaaaaatcgagcgctgcaaagacgtccacaaggggaagaactacaactacc
tcaaagcggggtcgaggtcgtggtagtacaacaaagaaataa
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