Wallemia mellicola: WALSEDRAFT_21205
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Entry
WALSEDRAFT_21205 CDS
T03142
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
wse
Wallemia mellicola
Pathway
wse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WALSEDRAFT_21205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_21205
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
WALSEDRAFT_21205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Sec8_N
BAR_3_WASP_bdg
AAA_29
AAA_22
AAA_30
ABC_tran
AAA_27
Flavodoxin_4
Motif
Other DBs
NCBI-GeneID:
18470878
NCBI-ProteinID:
XP_006959847
JGI:
Walse1_21205
UniProt:
I4Y834
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MDEDIKDAPVEEESDDLIEEIDLEDIEKSKQAPKPKPAPKETPAKAARPSAAGRTPSGGN
KSLLTKAERQVQQTKAAKKDAESPFMFLHPPYDKYQNPIGHPDYDPHTLHIPPKYWKEFS
PFEKQFWEIKADHFDTILFFQKGKFYELYENDAIIGHREFDLKLTERVRMCMVGVPEMSF
DFFAAKFLALGYKVGKVEQRETAIGMDMRQRADKKPAGGAKAGKSDDKLVRRELRSVLTN
GTLVDPKMLADEAASHCVSIKETSSSINGNKPTFGLCILDASTGEFNLATFEDDKSRSKL
ETLIRQLRPKEIVHEKGNLDQLTLRVLRNITSISCLWTSLNSGKEGMDAIETITELKNLF
NKDNEDADKVKLPDAIESLIENTEAIESLGNLMWYLRSLNLDRDLLSLGNFNIYDATREG
QAMILDGRTLAHIEVLVNSEGGEDDTLLKLLNRCTTPFGKRLFRIWLCTPLRSSKAINER
LNAVDDVISNTGFTQEFDSNVKGLPDLERLLSRIHAMSVRPKQFLQVLEAFNRLQQVFEK
LEEEASEFKSQSLKATLRSIPDLREYISNIESKFDLTENDTLMPCDGADEAYEDAKKLNE
DLEQELDEILERYKREFKIKTISYKDVGTKEIYSIEMPKKTSVPANWAKLSSTQKVDRYW
SPEVRQLVQKVKEARETRASALNDFAKKLYAAFDEDYKTWIAAVKACAEIDCINSLAKSS
INMEEPRCRPTIIEADEAIIDFDQLRHPSMALRRDFVANDVKLGGNDEGTMLLTGPNMAG
KSTLLRMTAAAVIMAQIGCYVPAQSATIAPVDRIASRLGAYDNMFSNSSTFMVELAETSK
IVNETTPKSLLILDELGRGTSTTQGIAIASAVLQHIASFLGCCLFSTHYSSLGDFGSTHP
NIKACHMASEVNSEKREIRFLYKLVEGVALDSYGHHVAKLAGVPLPVVVRAEQVATEYTE
ANKLEQEKAEAKRHKTIPLAAQSDFATMIRLARQGANELTFRDKRNLRFISEANKVN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatattaaagacgcgccagttgaagaggagagtgacgacctaattgaggaa
attgatttagaagatattgaaaagtctaaacaagcgcctaagccaaagccagcaccgaaa
gagacacctgcgaaggcagccagaccgtcagctgcaggacgcacaccctcaggcggtaac
aagtcacttcttacgaaagctgagcgtcaagtgcagcagacaaaagctgctaagaaggac
gctgaatcaccattcatgttcttgcacccgccatatgataaataccagaaccctattgga
catcccgactatgatccacacacattacatatccctccaaagtactggaaagaattttca
ccattcgagaagcagttctgggaaatcaaggctgatcactttgacacaattttgttcttt
caaaagggtaaattctacgagctttatgaaaatgatgctattattgggcaccgagaattc
gatttgaagttgacggaacgtgtcaggatgtgcatggttggtgtaccagagatgtctttc
gacttcttcgccgcaaaattcttggcattgggttacaaagtaggtaaagttgaacagcgt
gaaacagcaattggtatggatatgcgtcaaagagcggacaagaaaccagcaggtggagct
aaagcaggcaaatctgatgacaaactcgtccgtcgtgaattacgttccgtattgacgaat
ggtacattggtagatccaaagatgttagctgatgaggcggcatctcattgtgtatccatc
aaggagactagcagtagtatcaatggtaacaaacctacgtttggcttatgtatcttggac
gcaagtactggtgagttcaatctcgccacttttgaagacgacaagtcgagatcaaaactg
gagacattgattagacaattacgtcctaaagaaattgttcatgagaaagggaatctcgac
caactcactttacgtgtcctccgaaacattacgtctatttcatgtttgtggacatcactt
aactccggcaaagagggaatggacgcgattgaaactataactgaactgaagaacttgttt
aataaggataatgaagatgctgataaagttaaactacctgatgctatcgagagcctcatt
gaaaataccgaggctattgagtctttgggtaacttaatgtggtatcttcgttcactaaat
ctcgatcgtgatttgttatcgctcggtaatttcaacatttacgacgctacacgtgaaggt
caagccatgatattggatggtcgcacattagctcatattgaagttcttgttaatagtgaa
ggcggtgaagatgatacattgttgaagttgctcaacagatgcactacgccatttggtaaa
cgtctatttagaatctggttatgtacgccccttcgctcttccaaagctatcaatgagcgt
ctcaatgcagtcgatgatgtgatatcgaatactggatttactcaagaatttgatagtaac
gtgaagggtttacctgatttagaaagactgctttcaagaattcacgctatgtccgtacgt
ccaaaacagttcttacaggttttggaggctttcaacagacttcaacaagtgtttgagaag
ttagaagaagaagcgagtgaatttaaatcgcagtctcttaaagctacactcagatctata
cctgatctcagagaatatatatcaaatatcgaatcaaagttcgatttaaccgaaaatgac
acgcttatgccatgcgatggtgctgatgaagcttacgaagatgctaagaagcttaatgaa
gatttagaacaagaacttgatgagatcttagagaggtataaacgcgaattcaagattaag
actataagttacaaagacgtcggtactaaagagatatactctattgaaatgccgaaaaag
acatctgttcctgctaactgggcaaagttgtcgtcaacacaaaaggtagacagatattgg
tcacctgaagtccgtcaactcgtacagaaagttaaagaagcaagagagacacgtgctagt
gctttgaatgactttgctaagaagctctacgcagcattcgatgaagattacaagacatgg
atagcagctgtcaaagcttgtgctgaaatagattgcattaattcgctggcaaaatcatcc
atcaacatggaagaacctagatgccgaccaaccattatagaagcagatgaagccatcatt
gactttgatcagcttcgccatccttcaatggctctcagaagagatttcgttgctaatgat
gtcaaacttggtggtaacgatgagggtacaatgttattaactggtccgaatatggctggt
aaatccacgctccttcgtatgactgcagctgctgtcatcatggcgcagattggttgctac
gttcctgctcaaagtgctactattgcccctgtcgataggattgcaagtagacttggtgct
tatgacaatatgttcagcaactcgtcaacattcatggtagagttggcagaaacctctaag
atcgttaatgaaaccacgccgaagagtttgttaattttggatgaattgggaagaggtaca
tctacaacgcagggtattgcgatcgcaagtgcggtattacaacacattgcctcatttttg
ggttgctgtttgttctccacccattattcaagtttaggtgactttggatctacacatcca
aacatcaaagcctgtcatatggcttctgaagtgaatagtgaaaagagagaaatacgcttc
ctctataagcttgttgaaggtgttgcacttgatagttatggtcatcatgtcgctaaactt
gctggtgtaccacttccagttgtagtcagagctgaacaggtagcaactgagtatacagag
gctaacaaactggagcaagagaaggcagaagctaaaagacacaaaactatccctcttgca
gctcaatctgactttgcaacaatgattagattagcaagacaaggtgcaaatgagctgaca
tttagagataaacgcaatttaagattcatcagtgaagcaaacaaagtaaattga
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integrated database retrieval system
