KEGG   Wallemia mellicola: WALSEDRAFT_22184
Entry
WALSEDRAFT_22184  CDS       T03142                                 
Name
(RefSeq) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
wse  Wallemia mellicola
Pathway
wse03030  DNA replication
wse03410  Base excision repair
wse03420  Nucleotide excision repair
wse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WALSEDRAFT_22184
   03410 Base excision repair
    WALSEDRAFT_22184
   03420 Nucleotide excision repair
    WALSEDRAFT_22184
   03430 Mismatch repair
    WALSEDRAFT_22184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wse03032]
    WALSEDRAFT_22184
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_22184
Enzymes [BR:wse01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     WALSEDRAFT_22184
    6.5.1.6  DNA ligase (ATP or NAD+)
     WALSEDRAFT_22184
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     WALSEDRAFT_22184
DNA replication proteins [BR:wse03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    WALSEDRAFT_22184
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     WALSEDRAFT_22184
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     WALSEDRAFT_22184
   NER (nucleotide excision repair)
    Other NER factors
     WALSEDRAFT_22184
   MMR (mismatch excision repair)
    Other MMR factors
     WALSEDRAFT_22184
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase eIF-3c_N
Other DBs
NCBI-GeneID: 18470915
NCBI-ProteinID: XP_006960350
JGI: Walse1_22184
UniProt: I4Y6G0
LinkDB
Position
Unknown
AA seq 643 aa
MFLPKQQQKALAEDKVSDKKSAVKNDNAIDKKTTNKKSLPSTDQDTITFAQLTDTFTKIE
ATTKRLEITDYLTQFYKQVILTKPEELLMTLYLTINRLCPDYEGLELGIGESILIKAVVE
STGRTTAKVKEELKKVGDLGTVAQSARKNQPTMFKSKDLNVPTVFKNLKEIATASGSQSQ
TKKIGIIMKMLTSCNSNTNEVKFLIRLLEGKLRIGLAEKTVVVSLANAIVLSNNEDATKE
DLERGVEIVKQVYSELPSYDLIIPALLDGGVDNLQERCHLTPGIPLKPMLAKPTKAVTEV
LDRFEGRSFTCEYKYDGERAQIHYHDGKVKVFSRNSEDMSMKYPDLVEQLPRAIKPGVKN
FVIDSEAVAFDKQTKKILPFQELTRRKRKDVKVEDITVKVHIFAFDLLYFNDKPLLHEDL
TRRREMLSDNFETVEDEFAMAKSMEAQSTEEIQAFLEESVKDSCEGLMVKMNQGESAWYT
PSKRSMNWLKLKKDYLSGVGDSLDLVVIGGYYGKGKRTNVYGAYLLACYDQDSESYQSIC
KIGTGFSEEMLDSHYKLLNPLEITAPKSYYKLGSAKPDVYFEPQAVWEVLTADLSLSPVY
TAAAGEISERGISLRFPRFIRVRDDKAADDATSSEQVSQNIYI
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtttcttcctaaacagcaacagaaggcgcttgctgaagataaagtcagcgataagaag
tcagctgtaaagaatgacaatgcaatagataaaaagacaacgaataaaaaatcactacct
tccactgatcaagataccatcacattcgcgcaactaacggatacattcacaaagatcgaa
gcaaccaccaaacgtttggaaatcactgactaccttacacaattttacaaacaagttatt
ttaaccaaaccggaggaacttttgatgacactttatctcactattaatcgtctttgccct
gattatgaaggtttagaacttggtatcggtgagagtatactcattaaagctgtcgttgaa
tcaacgggacgtacaacagcaaaagtgaaagaggaactaaagaaagttggtgatcttggt
actgtcgcacaatcagcgcgtaaaaatcaaccaactatgtttaaatcaaaagacttaaat
gtaccgacggtatttaaaaacctcaaagagattgctacagcatctggtagtcagtctcaa
accaaaaagataggtataattatgaaaatgctcacaagttgcaattcaaacactaatgaa
gttaaattcctgattagattattagaaggtaaattacgcattggtttagcagagaagact
gtcgtcgttagtctcgctaatgctattgttttatcaaacaatgaggatgctacaaaggaa
gatctcgaaaggggtgttgaaattgtaaaacaagtttactctgagttaccatcgtatgac
ttaattatacctgctctacttgacggtggtgttgataacctacaagaaagatgtcattta
acaccaggaattccgcttaaaccgatgcttgcgaaaccaaccaaagcagtcaccgaagta
ctcgataggtttgaaggacgtagcttcacctgcgagtataaatacgacggtgaacgtgca
caaatccactatcatgatggtaaagtaaaggttttctctcgtaattctgaagatatgtct
atgaaatatccagatttggtggaacagttaccaagggcaatcaaaccgggtgtaaagaac
ttcgttattgacagtgaagcagttgctttcgataaacaaacgaagaaaatattaccattt
caagaactcacccgtcgtaaacgtaaagatgtcaaagttgaagatattacagtaaaggta
catattttcgcgtttgacttactttacttcaatgataaaccacttcttcatgaagatcta
actcgacgtcgcgaaatgttaagtgataatttcgaaacagttgaagatgagtttgcaatg
gcaaagtcaatggaagcccaatcaactgaagagattcaagcattcttggaagaaagtgta
aaagatagctgtgaaggattaatggtcaaaatgaatcaaggtgaaagcgcttggtataca
ccttccaagagatcaatgaattggctgaaattgaagaaagactatctaagtggggttggt
gattcattggatttggttgttattggtggatactatggtaaaggtaaacgtacaaatgta
tatggcgcatatttattagcatgttatgatcaagatagtgaatcatatcaaagtatatgt
aaaattggtactggatttagtgaagaaatgcttgactcgcattacaaactactaaatcca
ctagagattacagcaccaaaatcatattacaaacttggttcagcgaaaccagatgtttat
tttgaacctcaagcagtttgggaagttctaacagcagatttatcattatcacctgtgtat
acagcagcagcaggtgaaataagtgaacgcggtattagtttacgtttcccacgtttcatt
agagttagagatgataaagcagcagatgatgcaacatcttctgaacaagtaagtcagaat
atatatatataa

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