KEGG   Wallemia mellicola: WALSEDRAFT_29688
Entry
WALSEDRAFT_29688  CDS       T03142                                 
Name
(RefSeq) putative histone-binding protein rbbD
  KO
K10752  histone-binding protein RBBP4
Organism
wse  Wallemia mellicola
Pathway
wse03082  ATP-dependent chromatin remodeling
wse03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    WALSEDRAFT_29688
   03083 Polycomb repressive complex
    WALSEDRAFT_29688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:wse03036]
    WALSEDRAFT_29688
Chromosome and associated proteins [BR:wse03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     WALSEDRAFT_29688
  Histone modification proteins
   HAT complexes
    HATB complex
     WALSEDRAFT_29688
   HDAC complexes
    Sin3A-HDAC complex
     WALSEDRAFT_29688
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     WALSEDRAFT_29688
    PRC2.2
     WALSEDRAFT_29688
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     WALSEDRAFT_29688
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    WALSEDRAFT_29688
  Chromatin remodeling factors
   NuRD complex
    WALSEDRAFT_29688
   NuRF complex
    WALSEDRAFT_29688
   NuRF complex (fruit fly)
    WALSEDRAFT_29688
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_DCAF4 eIF2A WD40_CFAP43 WD40_MABP1-WDR62_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 18471109
NCBI-ProteinID: XP_006959605
JGI: Walse1_29688
UniProt: I4Y8Q6
LinkDB
Position
Unknown
AA seq 424 aa
MNAGNDIDPEEEQTKTINEEYKTWKKHAPLLYDLVVSHTLEWPTLTTQWFPDAETSPDKD
YTTHRLLMGTNTSNLEQNMLHIAQIKLPKQSDDVDPAKYEDEKGEIGSHSATNKVEIIQS
INHDGEVNRARYNPYNPDLIATRTVMGPIYIFDRTRHELKPKADGTCNPQIVLRGHEGEG
YGMEWSPLKENHIISASTDTTVRHWDISNYQSTNNILDPINTYRGHTAAVEDISWHASHE
NIFASVSDDQHLFTWQPRWDTRDATQPHQRVKAHDADVNCVAFSPSQPFLCITGSADKTI
GLWDLRNLKKRLHSIEGHSEDVMNLEWSPHAETVFASASNDKRVCLWDISRIGEEQTPED
AEDGPPELMFMHGGHTNAITDISWSKTLPFTMMSASEDNVVQLWSPSSHLYAAEEAPIDV
DELE
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaacgctggcaacgatatcgacccagaggaagaacaaacaaagacgataaatgaagag
tacaaaacttggaagaagcacgcacctttgctatacgatctcgtagtctcacacactctc
gagtggcctacattaacaacccagtggtttcctgatgctgaaacttcaccagataaagac
tacacgacccatagacttttaatgggtacaaatacatcaaatttagaacaaaatatgtta
catatcgctcaaataaagctaccaaagcagtcagacgacgttgatccagcaaagtatgaa
gacgagaagggtgaaattggcagtcatagcgcgactaacaaagtagaaataatacaatct
atcaatcacgatggtgaggttaacagggcgcgctataatccatacaacccagacttgatc
gctacacgtacagttatgggtccaatttacatctttgatcgcacaagacatgagttaaag
ccaaaagctgatggtacttgtaaccctcagatagttctacgcggtcatgaaggtgaagga
tacggtatggaatggtcacctcttaaagagaatcacatcatttccgcatctactgatacc
accgtccgtcattgggatatatcaaactaccaatcaacaaacaatatcttagatcctatc
aatacataccgcggccacactgctgctgttgaagatatctcttggcacgcatcacacgag
aacatatttgcatccgtatccgatgatcaacatctcttcacgtggcaacctagatgggac
actcgtgatgctacccagccacaccagagagtaaaagcacacgacgcagacgtcaactgt
gttgcgttctcgccatcccaaccattcctttgcattactggatcagcagataagactatt
ggtttatgggatctcagaaatcttaaaaagcgtcttcattctattgaaggtcacagtgag
gatgtaatgaacttggagtggtcgccgcacgcagagactgtctttgcatctgccagtaac
gataaaagggtttgtttgtgggatatcagccgtattggtgaagaacaaacacctgaagat
gctgaagatggtccacctgagcttatgttcatgcacggcggtcacacgaatgcgattact
gatatcagctggtccaagaccctaccattcacaatgatgagcgctagtgaagacaacgtc
gtccaactctggtcgccatcctcacatctatacgctgcagaagaagcgccaatcgatgtc
gatgaattggagtaa

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