Wallemia mellicola: WALSEDRAFT_30985
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Entry
WALSEDRAFT_30985 CDS
T03142
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
wse
Wallemia mellicola
Pathway
wse03013
Nucleocytoplasmic transport
wse03015
mRNA surveillance pathway
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_30985
09122 Translation
03013 Nucleocytoplasmic transport
WALSEDRAFT_30985
03015 mRNA surveillance pathway
WALSEDRAFT_30985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_30985
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_30985
Enzymes [BR:
wse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WALSEDRAFT_30985
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
WALSEDRAFT_30985
Spliceosome [BR:
wse03041
]
Complex C
Other components
EJC/TREX
WALSEDRAFT_30985
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
WALSEDRAFT_30985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
18471228
NCBI-ProteinID:
XP_006956118
JGI:
Walse1_30985
UniProt:
I4YK14
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADNEDLIDYEEEEVAPQQQQQQQPTEQADAKDKKGSYVGIHSTGFRDFLLKPELLRAIS
DLGFEHPSEVQQECIPQAILGMDVVCQAKSGMGKTAVFVLASLQQVEPVDGEVSVIVLCH
TRELAYQIKNEYGRFSKYVPNIRTSVFFGGVPITTDQETLKNKEKCPHVIVGTPGRINAL
VRDGSLKGSAIKHFVLDECDKMLEQLDMRRDVQEIFKVTPHHKQVMMFSATLSKEVRPVC
KKFMQSPLEIYVDDETKLTLHGLQQHYVKLSESAKNRKLNDLLDSLDFNQVVIFVKSTLR
ANELDKLLRECNFPSICIHSRMSQEERIARYTKFKQFETRILVATDIFGRGIDVERVNIV
INYDTPTDADSYLHRVGRAGRFGTKGLAITFVSQDEDDEVLKAIQSRFEVAIPELPETLE
ASTYMTS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacgaagatctcatcgattacgaagaagaagaagtcgcaccacaacagcag
cagcaacaacaacctaccgaacaagctgacgcgaaggataagaagggttcttacgttggt
atccactcaactggtttcagagatttcttattgaagcctgagttattacgtgccatttca
gatttaggtttcgaacacccttctgaagtacaacaagagtgtattccacaagctattttg
ggtatggacgttgtctgtcaagctaagagtggtatgggtaaaactgcagttttcgtttta
gcttctttacaacaagttgaaccagtagatggtgaagtttccgttatcgttttatgtcac
actagagaattagcctaccaaattaagaacgaatacggtagattctcaaagtacgtacca
aacatcagaacctctgttttcttcggtggtgtcccaatcactactgatcaagaaaccttg
aagaacaaggagaaatgtccacacgttatcgtcggtactccaggtagaataaatgcttta
gttagagatggtagtctcaagggatctgctatcaagcatttcgttttagatgaatgtgac
aaaatgttagaacaattagatatgagaagagacgtacaagaaattttcaaggttacacca
caccacaagcaagttatgatgttttcagctactttatcaaaggaagttagaccagtttgc
aagaaattcatgcaatcacctttagaaatctacgttgacgatgaaaccaagttaacattg
catggtttacaacaacattatgttaaactttcggaatcagctaaaaaccgtaaattgaat
gatctccttgattcattggatttcaaccaagttgtcattttcgtaaaatcgacacttaga
gctaatgaattggataagctcctcagagagtgtaatttcccatccatttgtatccactcc
agaatgagtcaagaggagagaatagcaagatacaccaagttcaagcaatttgagacaaga
atcttggttgcaactgatatctttggtagaggtattgatgtagaaagagtcaacattgtt
atcaactatgatacgccaacagatgctgactcataccttcacagagttggtagagcagga
agatttggtacgaaaggattagcgatcacgttcgtttcacaagatgaagatgatgaggtc
ctcaaggcgattcaatctagatttgaagttgcaatcccagagttgcctgaaaccttggaa
gcatctacatatatgacttcataa
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