KEGG   Wallemia mellicola: WALSEDRAFT_32658
Entry
WALSEDRAFT_32658  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
wse  Wallemia mellicola
Pathway
wse03040  Spliceosome
wse04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_32658
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    WALSEDRAFT_32658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_32658
   04121 Ubiquitin system [BR:wse04121]
    WALSEDRAFT_32658
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_32658
Enzymes [BR:wse01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     WALSEDRAFT_32658
Spliceosome [BR:wse03041]
 Complex B
  Other components
   Prp19 complex
    WALSEDRAFT_32658
 Complex C
   Prp19-CDC5 complex
    WALSEDRAFT_32658
Ubiquitin system [BR:wse04121]
 Ubiquitin ligases (E3)
  U-box type E3
   WALSEDRAFT_32658
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    WALSEDRAFT_32658
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR3_2nd EIF3I Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 CFAP251_N Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 RMC1_N Beta-prop_RIG_1st Tricorn_2nd PEP5_VPS11_N WD40_like PAC11 WD40_RFWD3 zf-Nse
Other DBs
NCBI-GeneID: 18471538
NCBI-ProteinID: XP_006958502
JGI: Walse1_32658
UniProt: I4YBY1
LinkDB
Position
Unknown
AA seq 509 aa
MFCAISGEPPQEAVVSVKSGHLFEKRLIEKYINENGKDPISGEQLAVDDLVSVKSEPKNV
APRPPSLTSVPTLLSTLQSEWDSLVLETHSLREQYVNGRKDLAHALYQVDAAHRVIARLM
VERDQAREALSNIQAGLGVAPAAEAAPANGGDVEMQEEEAASGLPADVVSNIDSVAAVLT
AERKKRKVPDGAASKDTVKAFNAKDNLASFHSASPAGVNATALSNDNNLLITGGNDKHVQ
IYDRQEQKTIATLKGHTKKINALEWREKEGLKTLVVSAGDKRVRVYSKEEKGWKMTGEFK
NRTGGEVTGMKVHPTKNYAISVGTNQSWSLHNLDTLETLLDVSPPDGESGDFEYQSVDIH
PDGVIFATGTQSGICRIWDLKTSKIAANFESPNSHGPIVSLSFSENGYYLAAAFAGSSTI
EIFDLRKLKSIHTIQLEEGVSSATTVRFDPSAQFLAIAGSDVRILANKTWEELVRFEDNA
STVETLSWGLGGNELIASGLDRTIRFYAA
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgttctgtgctatatctggtgaaccaccacaagaggctgtcgtctctgttaaatctggt
cacttatttgagaagcgtttaattgagaagtatatcaacgagaacggaaaagatccaata
tcaggcgagcagttggcggttgatgatctagttagtgtaaaatctgaaccaaagaatgtc
gcaccaagaccaccaagcttgacctctgtaccaactttgctctccactttgcagtctgaa
tgggattcactcgttttagaaacacactccctccgtgagcagtacgtaaacggacgcaaa
gatcttgcacacgcactctatcaagtagatgcagcccaccgtgtcattgcacgccttatg
gtcgagcgtgatcaagctagagaagctttatccaacatacaagcaggtttaggcgttgct
ccagcagctgaggcagccccagctaatggcggcgatgtagaaatgcaagaggaggaagca
gcaagtggattaccagccgatgtcgtcagtaatatcgattctgtcgcggcagtactcact
gcagaaagaaagaagcgcaaggttccagatggcgctgctagcaaggacacagtaaaggct
ttcaatgccaaggataaccttgcatcattccattcagcttctccagcaggtgtgaacgca
actgcactctcaaatgacaacaacctcttgattacaggtggtaatgacaaacatgtccag
atctatgatcgtcaggagcaaaagacgatcgcaacactcaagggacataccaagaagatt
aatgctttagagtggagagagaaggaaggtttgaagaccttggtcgtctctgccggtgat
aagcgtgttagggtatacagtaaagaagagaaaggatggaagatgaccggtgaattcaaa
aaccgcacaggtggtgaagtaacaggcatgaaagtacacccaactaagaattatgccatc
agcgttggtacaaaccaaagttggtcacttcataacctcgatacactcgagacattactc
gatgttagcccacctgatggtgaatctggcgatttcgaataccaatccgtagatatacac
cctgatggtgtcatatttgcaactggtacacaatcaggtatttgtcgtatttgggattta
aagacatcaaagattgcagcaaactttgaatcaccaaatagtcatggtccaattgtttcg
ctttctttctcagaaaatggatactatttggcagctgcatttgcaggtagctcaactatt
gaaatattcgatttgagaaagttgaaatcaatccatacaattcaattagaagagggagtt
tcaagtgcaacaaccgttaggtttgatccaagtgcacagtttttggcgattgctggatcc
gatgttagaattcttgctaacaaaacatgggaagaattggttagatttgaggataacgcg
tctactgtagaaacactcagttggggtcttggtggaaatgagctcatagctagtggcttg
gatagaacaataaggttctatgccgcttag

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