Wallemia mellicola: WALSEDRAFT_32658
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Entry
WALSEDRAFT_32658 CDS
T03142
Name
(RefSeq) WD40 repeat-like protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
wse
Wallemia mellicola
Pathway
wse03040
Spliceosome
wse04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_32658
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
WALSEDRAFT_32658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_32658
04121 Ubiquitin system [BR:
wse04121
]
WALSEDRAFT_32658
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_32658
Enzymes [BR:
wse01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
WALSEDRAFT_32658
Spliceosome [BR:
wse03041
]
Complex B
Other components
Prp19 complex
WALSEDRAFT_32658
Complex C
Prp19-CDC5 complex
WALSEDRAFT_32658
Ubiquitin system [BR:
wse04121
]
Ubiquitin ligases (E3)
U-box type E3
WALSEDRAFT_32658
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
WALSEDRAFT_32658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
CFAP251_N
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
RMC1_N
Beta-prop_RIG_1st
Tricorn_2nd
PEP5_VPS11_N
WD40_like
PAC11
WD40_RFWD3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
18471538
NCBI-ProteinID:
XP_006958502
JGI:
Walse1_32658
UniProt:
I4YBY1
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MFCAISGEPPQEAVVSVKSGHLFEKRLIEKYINENGKDPISGEQLAVDDLVSVKSEPKNV
APRPPSLTSVPTLLSTLQSEWDSLVLETHSLREQYVNGRKDLAHALYQVDAAHRVIARLM
VERDQAREALSNIQAGLGVAPAAEAAPANGGDVEMQEEEAASGLPADVVSNIDSVAAVLT
AERKKRKVPDGAASKDTVKAFNAKDNLASFHSASPAGVNATALSNDNNLLITGGNDKHVQ
IYDRQEQKTIATLKGHTKKINALEWREKEGLKTLVVSAGDKRVRVYSKEEKGWKMTGEFK
NRTGGEVTGMKVHPTKNYAISVGTNQSWSLHNLDTLETLLDVSPPDGESGDFEYQSVDIH
PDGVIFATGTQSGICRIWDLKTSKIAANFESPNSHGPIVSLSFSENGYYLAAAFAGSSTI
EIFDLRKLKSIHTIQLEEGVSSATTVRFDPSAQFLAIAGSDVRILANKTWEELVRFEDNA
STVETLSWGLGGNELIASGLDRTIRFYAA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtgctatatctggtgaaccaccacaagaggctgtcgtctctgttaaatctggt
cacttatttgagaagcgtttaattgagaagtatatcaacgagaacggaaaagatccaata
tcaggcgagcagttggcggttgatgatctagttagtgtaaaatctgaaccaaagaatgtc
gcaccaagaccaccaagcttgacctctgtaccaactttgctctccactttgcagtctgaa
tgggattcactcgttttagaaacacactccctccgtgagcagtacgtaaacggacgcaaa
gatcttgcacacgcactctatcaagtagatgcagcccaccgtgtcattgcacgccttatg
gtcgagcgtgatcaagctagagaagctttatccaacatacaagcaggtttaggcgttgct
ccagcagctgaggcagccccagctaatggcggcgatgtagaaatgcaagaggaggaagca
gcaagtggattaccagccgatgtcgtcagtaatatcgattctgtcgcggcagtactcact
gcagaaagaaagaagcgcaaggttccagatggcgctgctagcaaggacacagtaaaggct
ttcaatgccaaggataaccttgcatcattccattcagcttctccagcaggtgtgaacgca
actgcactctcaaatgacaacaacctcttgattacaggtggtaatgacaaacatgtccag
atctatgatcgtcaggagcaaaagacgatcgcaacactcaagggacataccaagaagatt
aatgctttagagtggagagagaaggaaggtttgaagaccttggtcgtctctgccggtgat
aagcgtgttagggtatacagtaaagaagagaaaggatggaagatgaccggtgaattcaaa
aaccgcacaggtggtgaagtaacaggcatgaaagtacacccaactaagaattatgccatc
agcgttggtacaaaccaaagttggtcacttcataacctcgatacactcgagacattactc
gatgttagcccacctgatggtgaatctggcgatttcgaataccaatccgtagatatacac
cctgatggtgtcatatttgcaactggtacacaatcaggtatttgtcgtatttgggattta
aagacatcaaagattgcagcaaactttgaatcaccaaatagtcatggtccaattgtttcg
ctttctttctcagaaaatggatactatttggcagctgcatttgcaggtagctcaactatt
gaaatattcgatttgagaaagttgaaatcaatccatacaattcaattagaagagggagtt
tcaagtgcaacaaccgttaggtttgatccaagtgcacagtttttggcgattgctggatcc
gatgttagaattcttgctaacaaaacatgggaagaattggttagatttgaggataacgcg
tctactgtagaaacactcagttggggtcttggtggaaatgagctcatagctagtggcttg
gatagaacaataaggttctatgccgcttag
DBGET
integrated database retrieval system