KEGG   Wallemia mellicola: WALSEDRAFT_33953
Entry
WALSEDRAFT_33953  CDS       T03142                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
wse  Wallemia mellicola
Pathway
wse03420  Nucleotide excision repair
wse04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    WALSEDRAFT_33953
  09124 Replication and repair
   03420 Nucleotide excision repair
    WALSEDRAFT_33953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:wse04121]
    WALSEDRAFT_33953
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_33953
Ubiquitin system [BR:wse04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     WALSEDRAFT_33953
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      WALSEDRAFT_33953
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      WALSEDRAFT_33953
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd WDR55 WD40_2
Other DBs
NCBI-GeneID: 18471782
NCBI-ProteinID: XP_006960381
JGI: Walse1_33953
UniProt: I4Y6J1
LinkDB
Position
Unknown
AA seq 986 aa
MTDGISEIGRVDVNGRVIGIDKIIFQTHESLLLTLDHPQAQLVILSLSYENGVIKHIVEC
TKMLVETTGEPSYEYCNSIVDKSTQIGVSHLWQGQLHAFKLSYDDRRKTHIIDGRNSQID
HSVVLSMAFLATDKDEKPTLCRLVQSADVDNPLLVFEHLICKEDYVDISQTVLRIETQCP
SAQKIVAVEGKKRAVLVIGAFGCEYYEIPKKDLKGVRRKSSTTVTSPQVVDMEHLSVKSP
MAAVRGYTAVNDSCTAWLIGDEKGDIYYISISNFLEITLVGNSSVASTLQHLGSGFLFLG
SQNEDSKLLVVQTNPVRIVELENYTNLAPVSDMALTHPDGIQGQLVVCSGSNKTGKLRVV
TTGIGLCDIYQVGLGDSISNVFILGSHLLVSYLSTTKIYDIPNGLYGTFDESVAYQDVRR
DMPTLSVVSSGGRHGIYQSNLLTIFDDSGNLVERKETEIDFVSVSEDLESVLVVGVEGLV
LHQKGQRRNLHKPEHAATYAILDDNHIVYTTWTDYSVNIVDSRSNELIYSCKSRDDTPIL
SLLVENKVVLAGSADGSLYAFRFDEHLKSVDIQTVAIGSTPVCLTRSNDGLIFALCDVPS
IVTLDNTRLRYSSININYINGLTSYKTNDMVNYVFVQNDQLKFSRILSTENRVHIHSIEM
GADVPRQVAYKEDRYAVGCVRNAYRSDRTLYESSSCVKLLDNNYEQLAQMEMEKDEIVSV
VESLSIANMEVFVVGTYYNNETEGTEEATKGRFIILLVKDDKFIIASSFLVPGCVYAVCG
IDQKLAVAVNYQVRVYDIESIRDDTYKMRFIASYGNAFVVVSLTSVGKILVVADFLKSAI
YLQLDTERGALTQVGYDTAQRWSSLVVALDDGNEETFTTLGADIRFHLFALDRTSSGITS
RTLAQLPDNVSAIERAKTRSGDKLQPLAIYGTSAGAICALASADSSYEGLNGGRVKVRQE
VGTRQDQNVVDGDILSAHDDELQRLL
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgacagatgggattagcgagatcggtagagtagatgtgaatggacgagtgataggaata
gataagattatattccagacccacgagagtttattactcacactggaccacccacaagct
cagctcgtcattctgagcttatcgtacgaaaatggcgtaataaagcatatcgtggagtgt
acaaagatgctggttgaaactacaggcgagcccagttacgaatattgcaattcgatagtg
gataagagtacgcaaataggtgttagtcatctctggcaaggtcaattgcacgctttcaag
cttagctatgacgatagaaggaagacacatatcatcgacggacgcaacagccaaatagat
catagtgtggtcctatcaatggcattcctagctactgataaagatgaaaaaccaacttta
tgtcgtctggtgcagtcggcggacgtcgataacccattactcgtttttgagcatctgata
tgcaaggaagactatgtcgacatatcccaaacagttcttcgaatagaaacccaatgtccg
tcagctcagaaaatagtcgccgtggaaggcaagaaacgagcagtgcttgtaataggtgca
ttcggctgcgaatattacgaaatacctaagaaggatctcaaaggagtacgtcggaagtct
tcaacgacggtaacaagtcctcaagttgtcgatatggagcatctttcagttaagtccccc
atggcagccgtaaggggatatacggcggtaaatgattcttgtactgcttggctcattgga
gacgagaagggagatatctactacatatctattagcaatttcctcgaaatcaccttggtt
ggcaactcaagtgtggcctcaaccttacagcatcttggcagcggtttccttttcctcgga
tcccagaatgaagattcgaaactcctcgttgtgcagacaaacccggtacgcatagtggag
ttagagaattacacaaatttggcaccagtctctgacatggctctcacacatccggatggt
atacagggtcaacttgtggtatgctcgggcagcaataagacagggaaattgagagtcgtc
actactggaattggcttgtgcgatatctatcaagtgggattgggagattctataagcaat
gtcttcattttaggtagtcatttacttgtctcttatctatctacgacgaagatatacgac
attccgaatgggttatatggtacgttcgatgaatccgttgcatatcaggatgtacgacgt
gatatgcctacactgagcgttgtctctagtggtggcagacatggtatatatcagtcgaac
ttgctcactatctttgatgacagtggaaatctagtcgagcgaaaggaaacggaaatagat
ttcgtgtcagttagcgaagatctcgagagtgttttggttgtcggcgtcgaaggtctggta
ttacatcaaaagggacagcgaaggaatcttcataaaccagaacatgcagcaacctacgcg
atcctcgacgataatcacatagtttatacgacttggacagattatagtgtgaatattgtc
gattcacgcagtaatgagctgatatattcgtgcaaatcgcgcgatgatacaccaatatta
tcacttctggttgaaaacaaggttgtgctagctggtagtgctgacgggtcactatacgca
ttcaggtttgatgaacacctcaaaagcgtggatattcaaactgttgctattggtagcaca
cctgtttgtctcaccaggtctaacgatgggctcatattcgccttgtgcgatgttccctct
atcgttacccttgataacactcggttgagatattcttctatcaatattaactacataaat
ggtctcacaagctataaaactaatgacatggtcaattatgtattcgtacaaaatgatcag
ttgaagttctctcgaatcctctcgacggagaacagagtacatatacactctatagaaatg
ggagctgacgtaccacgccaagtggcctataaagaagacaggtatgcggtgggatgcgtg
cgaaatgcttacagaagtgatcgtacactttacgagagtagcagctgcgtaaaacttctt
gacaataattatgagcagcttgctcagatggagatggagaaagatgagatagtttctgtg
gttgagtctctcagcattgcaaatatggaggtattcgttgtaggaacgtattacaataac
gaaactgagggaacggaagaagctacaaaaggtcgctttattatactattagttaaggat
gacaagttcattattgctagtagcttcttagtccctggatgtgtctatgccgtctgcggt
attgatcaaaagctggctgtggcagtcaactatcaggtacgggtgtatgacattgagagc
atacgggatgatacttataaaatgaggttcatcgccagttacgggaatgcattcgttgtc
gtatctttaacgtcggtagggaagattctcgttgtcgcggacttcctcaaaagtgcgata
taccttcagttggacactgaacgcggtgcactcacccaagtgggctacgatactgcccaa
cgctggagctctcttgtcgtcgcacttgacgatggaaatgaggagacatttactacatta
ggtgctgacatccgcttccatttatttgcgctcgaccgtacatcatctgggatcacgtct
cgaacacttgctcaactacccgacaacgtctcagcgattgagcgtgcaaagactaggtcg
ggcgataaattacaaccattggctatatatggaacatctgcgggagcaatttgtgctcta
gcatctgctgattcaagttacgaaggtttaaacggcggccgcgttaaagtgagacaagaa
gttggaacgaggcaagatcagaatgtagtggatggggatatattaagcgctcatgatgat
gaactacagcgtcttttgtaa

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