Wallemia mellicola: WALSEDRAFT_35672
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Entry
WALSEDRAFT_35672 CDS
T03142
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
wse
Wallemia mellicola
Pathway
wse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WALSEDRAFT_35672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_35672
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
WALSEDRAFT_35672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Mre11_DNA_bind
DapB_N
Motif
Other DBs
NCBI-GeneID:
18471921
NCBI-ProteinID:
XP_006956636
JGI:
Walse1_35672
UniProt:
I4YH03
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MGFYKKMPKRLEGTIRLFDRGDFYSAYGVDAEYVATEVFKTQTVLKQMTSKKLQMTLPFL
SLNRISAQSFLREALTARQLKIEIWESEGGKKAQSFVLAKTASPGNLQPVEDLLFASSDI
LTAPISMAIKLSVKEGLLYVGSAYCDASCRELGLSEFVDNDLFSNVESLIIQLGVKECLM
PSNDKGTDHDLTKLKTLIERCGIVVTEVKPSDFNTKDIEQDLDRLLKDGAIKQSSEFNMK
IAMSSASVLINYLGLMGDAANFSQFTLKNHDLSHYMKLDASALRALSLFPSPGEVGGSKN
MSLYGLLNHCKTAQGQRLLAQWLKQPLMTLHEIHSRQNLVEWFMNEVELRGTMREQIMTK
MPDLHRLSKRFQRGVANLEDVVRTYQACLNIPKLLELIRQTQESVMDDSLKLLIEETYIK
PFEEFSGSLNMLIEMVESTIDLDELANHNYVIKPEFDDDLKAYRRKLEVIRDGLDDEHQA
VGDDLGLDLGKKLHMERHQTYGYCFRVTKAEAKSVSNNKKYHELSTLKSGTYFRTSTLRD
LGDEYKEVQTAYDKKQSSLVKEVVGIAATYCPVLESLDNVLAHVDVLMDFAYVSDKSANP
FVKPEVLEKGTSDMTLSEARHPCLEVQDGVDFIANDVTLKRDESEFLIVTGPNMGGKSTY
IRQIGIIALMAQIGCYVPCTKATVPVFDCILSRVGAGDSQIKGISTFMAEMLETATILKS
ATRDSLIIIDELGRGTSTYDGFGLAWAISEYIAVELRSFCVFASHFHELTALSNQQTHVK
NLHVVAHVEQENDQEDVSLLYKVEPGISDKSFGINVAQMAGFPESVIKLAKRKADELEDL
EGHEEKKQKFSDDDINTGVNLVKEFMQSFAESVQETNEREALMKTYEQYKERIQESRWAS
YVIDSL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggattttacaagaaaatgccaaaacgccttgaaggtactattcgcctattcgataga
ggagatttttactctgcctatggtgtagacgcagaatatgtcgcgacagaagtctttaaa
acccagactgttttgaagcaaatgacatcaaagaaactacaaatgacactgccttttctg
tcacttaatagaatatccgctcaatctttccttcgcgaagctctaacagcaagacagctg
aaaattgaaatctgggaatcagaaggtggaaagaaggcacagtcgtttgtcttagcgaag
acagcctcgccgggaaacttacaaccagtagaagatttgctatttgcctcttctgatatc
ctcacagcgcctatctcaatggcgataaagcttagcgttaaggaaggcctcttatatgtt
ggctcagcgtactgtgacgcaagctgtcgcgaattaggattaagcgagttcgttgataat
gatcttttctcaaatgtcgaatctttgatcattcaactcggcgtaaaggaatgcttgatg
ccatccaacgacaaaggtactgatcacgatttgacgaaactcaagacattgatagagaga
tgtggtattgtcgtcacagaagtcaaaccatcagatttcaacacgaaagatatagagcaa
gatctcgataggctcctcaaagatggagctatcaaacaatcctccgaatttaatatgaag
atagcaatgtcctcagcttcagttcttattaactacctaggcttaatgggtgacgctgcg
aatttctctcagttcacattaaagaaccatgacttatcacactacatgaagctcgacgcg
tcagccttgcgtgcacttagtcttttcccgtccccaggcgaagtaggaggctcgaagaat
atgtcactttatggtttgttaaatcattgcaaaacagcccaaggacaaagactactagca
caatggttaaaacaacctttgatgacgttacacgagattcactcacgtcagaatctagtt
gaatggtttatgaatgaagttgaattgagaggcacaatgcgcgaacaaataatgacgaag
atgccagacttacaccgtctttcgaagagatttcaaaggggtgtagcaaatcttgaagat
gtagttagaacataccaagcttgtctgaatataccaaaattattagaactcatcagacaa
actcaagaatctgttatggatgattcactaaaattactcattgaggagacctatattaag
ccatttgaggaattcagcggtagtttgaacatgttgatagaaatggttgaatcgactatc
gatttggatgaattagctaatcataattacgtaataaagcctgagttcgacgacgatttg
aaggcatataggaggaaactggaagttatcagagatggtcttgatgatgagcaccaagct
gttggtgatgaccttggtcttgacctaggaaaaaagctgcatatggagagacatcaaaca
tatggctactgttttagagtgacaaaagcagaggctaagagtgtgtcgaataacaagaaa
tatcatgagttgtcgaccctcaagagtggtacttacttcaggacctctacactcagggat
ctgggtgacgagtacaaggaggtacagactgcgtatgataagaaacaatcaagtttggtc
aaagaggtcgttggtatagccgctacctattgccctgttctggagagtttggataatgtc
ctcgctcatgttgatgtcttaatggactttgcctatgtttctgacaaatctgccaatcca
ttcgttaagccagaggtattggagaaagggacaagcgatatgacccttagcgaagcacgc
catccttgtttggaagtacaagatggggttgactttatagccaacgacgttacattgaag
agggatgaaagcgaatttttgatagttacaggtccaaatatgggtggtaaatcaacttat
attcgtcaaattggtataatagcattaatggcccaaattggttgttatgtaccatgtaca
aaagcaacagtacccgtgtttgattgtatattatcacgtgtcggtgctggtgattcccag
attaagggtatttcaacatttatggctgagatgttagaaacagcgacgatattgaaatca
gcaacaagagatagtcttattattatagatgaattaggtaggggtacgtcaacttacgat
ggtttcggtctagcttgggctatttccgagtatatagctgtagaattacgcagtttctgt
gtatttgcatctcacttccatgagcttacagctctatcaaatcagcaaacacatgtgaaa
aaccttcacgtcgtagcacacgtagagcaggagaatgaccaggaggacgtcagtttgtta
tataaagttgagccaggtattagtgataagagtttcggtataaatgtcgcccaaatggct
ggattccctgagagtgttataaaactcgctaaacgcaaagctgatgaattggaagatttg
gaagggcacgaggagaaaaaacagaagttctctgatgatgacataaacactggtgtcaat
ctcgtaaaagagttcatgcaatccttcgcagaaagcgttcaagagacgaatgaacgtgag
gcactaatgaaaacatacgaacaatacaaagagcgtattcaggaatcacgttgggcaagc
tacgttattgattcattgtaa
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