Wallemia mellicola: WALSEDRAFT_36157
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Entry
WALSEDRAFT_36157 CDS
T03142
Name
(RefSeq) TPR-like protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
wse
Wallemia mellicola
Pathway
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_36157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_36157
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_36157
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
WALSEDRAFT_36157
Spliceosome [BR:
wse03041
]
Complex B
Other components
Prp19-related factors
WALSEDRAFT_36157
Complex C
WALSEDRAFT_36157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_19
TPR_12
TPR_8
ARM_TT21
NRDE-2
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
18471947
NCBI-ProteinID:
XP_006956955
JGI:
Walse1_36157
UniProt:
I4YG17
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MTIDELKDIFPLTKPLPTPSNNKSIAKVIDLQFEEELSRNPTNLRTWFSYIDVIQSKLDI
LTPIDDDDNLDIVLKEILGPLATEDRRSIYQTLTSIYERALAMFPLNYRLWFNYLLMRLS
FLTGNITAADISQLKNTRRRLVKGQPIVDLEKGDERIPWKEVSESNYLDGIVGESEWKAT
AAVFERCLSWMPSMPRLWILYLSLLSNPACPSRLAHTHARRTFDRALRTLPPSLHVRIWP
SYLNWAKSIGGNCLTIVWRRYLAVDPYPIETYIQLLLNGEQASSRALEACKLLLKLSRLS
RENHYVSPQGKSPYMLLNDWLEVCSEYADVIGVDVDQATALKPLQVGGKQNEMDRTEGTS
SDQLVKSTIDSSADADIDPSSSQKLDVDSLVRQDGLSIYKDQAGRLWTGLATYWIRRGEF
DKGREVFETAIDSVVTVRDFTQVFDAYAEFNEQLVTSLMDALADIEDEEKDDLEKELDDN
MQSFEGLMDRRPFLVNDVMLRRNPNDVNEWQKRVALFDNNDEKIVETYTQAISTIKPKQA
VGFGDLYANFAKYYESKGDLDSSRQIFEKASAVHYRRIDELAEIWIQWSEMELRHDNFEE
AISVMQRATVIPKNTKVDYYDESIAPQRRLFKSLKLWSFYVDIEESIGTTESTKKVYDKI
MDLKIANAQVIINYALFLEENDYFDDSFKVYERGVDAFTYPVAFELWNVYLSKFLKRYGG
SKIELARDLFEQAIEGMPSKFAKPIYLMYGKLEEEYGLAKRAIRVYERATQAVSDKDKFE
MYKILIAKVAMNFGMAATRPVYEKSLEELPDKAAIVMGLRFANLERKLGEVDRARSIYAH
TSQYCDPRIHKDFWEEWNQFEIDHGSEDTFREFLRIRRSVQASFNTEAHYLAAQSLHTNK
DKEGEDEEAANADPMANVERAIPGFVKGQTQAKVGADDGNEHENAEEATNNQDEIEIDEE
DM
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgatgaattaaaggatattttcccacttacaaaacctttaccgacgccttca
aataataagtcaattgctaaagtcatcgatttacagtttgaagaggaattatcgaggaat
cctaccaacttgagaacttggttcagttatattgacgttatacaatcaaagttggatatt
ttaacaccaatagatgacgatgataatcttgatatagttctaaaggagatactaggtccc
ttagcgacagaagatagacgttctatctatcaaacactcaccagtatctatgagagagca
ttggctatgtttccattgaattaccgcctttggtttaattatctcctcatgcgcttgtcc
ttcttgactggcaatatcaccgctgctgacattagtcagttgaagaacacgcgaagacgt
ttagtgaagggtcagccaatcgttgatttagagaaaggtgatgagagaataccgtggaag
gaagtatcagaaagtaattatctcgatggaatcgtcggtgaatctgaatggaaagccact
gcagccgtatttgaaagatgtttatcctggatgccatcaatgccccgtttgtggatatta
tacttgtccttattgagtaatcccgcatgtccttcacgtttggctcacacacacgcgaga
agaactttcgatagagcattacgtactctcccaccatcattacatgttcgtatatggcca
tcatacctcaactgggcgaagtcaattggtggtaattgcctcacgatcgtttggagacgt
tatttggccgtagatccatatccaattgagacttacatccaacttctgttaaatggtgaa
caagcatctagtagagctcttgaagcttgcaaattactactcaagttgtcaagattgtct
agagaaaatcattacgtttcaccacaaggcaagagcccgtacatgttgttgaatgattgg
ttggaagtatgttcagaatatgccgatgtaattggtgtagatgtcgatcaagcaaccgcc
cttaaaccacttcaagttggtggaaagcagaatgaaatggatagaacagaaggtacatcc
tccgatcaactagttaaatcaactatcgattcaagcgctgatgcagacattgatccttca
agttctcaaaaattggatgttgactccctcgttcgtcaagatggtttgtctatttacaag
gaccaagccggaagattatggactggtcttgcgacatattggatacgtaggggagaattc
gataaaggtcgtgaagtatttgaaactgcaatcgattccgtcgtcacagttagagatttc
actcaagtgttcgatgcttatgcagaattcaatgaacaactggttacatcccttatggat
gctttagcagatatagaagatgaggagaaggatgacttggagaaggagcttgatgataat
atgcaatcgttcgaagggttaatggatagaagaccattcttggttaacgacgttatgctc
cgtcgtaatcctaacgatgttaacgaatggcaaaaacgtgtcgcattgtttgacaacaac
gatgaaaagatcgtagaaacatacactcaagctatatcaactatcaagccgaagcaagct
gttggattcggtgatttatatgctaatttcgcaaaatactacgaatcaaagggtgattta
gatagctctcgtcaaatatttgagaaagcttcagccgttcattatagaagaattgacgaa
ttggctgaaatttggatacaatggtctgaaatggagttgcgacatgataactttgaagaa
gcaataagtgtaatgcaaagggcaacagtcattcctaagaatacgaaggtggattactat
gatgagagtatagcacctcagaggaggctcttcaagtcattgaagttatggtcattctac
gtcgatatcgaggaaagtataggtactacagagtcaacgaaaaaggtatacgataagata
atggatttgaagatagctaatgctcaagttatcataaactatgccttattccttgaagag
aatgactatttcgacgatagtttcaaagtttacgagaggggtgttgacgcgttcacttat
ccagttgcattcgaattgtggaatgtctacttgtcgaaattcttgaaacgctatggtgga
tctaagatagaactagctcgtgatctcttcgaacaggctatcgaaggaatgcctagcaag
tttgccaaacctatatacctgatgtatggaaagttggaagaggagtatggtctggcaaag
agggcaataagagtctacgaacgagcaactcaagcggtatccgacaaggacaagttcgag
atgtacaagatactaatcgcgaaggtagccatgaactttggtatggcagctacgagacca
gtgtatgaaaagagtttggaggagctgccagacaaggctgctatcgtcatgggcttgcgt
ttcgcaaaccttgagaggaagcttggagaagttgaccgtgcgagatcaatctacgctcac
acatcacaatactgtgatccaagaattcacaaagacttctgggaagaatggaaccaattt
gagattgaccacggcagcgaagacacattcagagaattccttcgtattcgtcgatcagtc
caggcatcattcaacaccgaagcgcattatctcgcagcccaatcgctacacactaacaag
gataaggaaggcgaagacgaagaggcagccaacgcggaccctatggccaatgtcgagagg
gcgatccctgggttcgtcaagggacagacacaagccaaggttggggcagacgacggcaat
gagcatgagaatgctgaagaagcaaccaacaatcaagatgagattgaaattgatgaagaa
gatatgtaa
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integrated database retrieval system
