Wallemia mellicola: WALSEDRAFT_36734
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Entry
WALSEDRAFT_36734 CDS
T03142
Name
(RefSeq) DEAD-domain-containing protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_36734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_36734
03036 Chromosome and associated proteins [BR:
wse03036
]
WALSEDRAFT_36734
Enzymes [BR:
wse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WALSEDRAFT_36734
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
WALSEDRAFT_36734
mRNA degradation factors
5'-3' decay
Decapping complex
WALSEDRAFT_36734
Chromosome and associated proteins [BR:
wse03036
]
Eukaryotic type
Gene silencing
piRNA pathway
WALSEDRAFT_36734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
18471976
NCBI-ProteinID:
XP_006957352
JGI:
Walse1_36734
UniProt:
I4YFE6
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MASTSQTQESEWKNQIRAPPKDLRPQTEDVTNTKGGEWEDFGLRRELLMGIFEAGFEKPS
PIQEEAIPSAIEGRDILARAKNGTGKTASFVIPSLEKINVQKPKIQALLLVPTRELALQT
SQVCKTLGKHLGIQVMVTTGGTTLRDDIMRLADPVHILVGTPGRILDLASKGVANLEECP
TFVMDEADKLLSPEFTPVMEQLLGHLPSSRQVMLFSATFPLIVKDFKEKHMRNPHEINLM
DELTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSC
FFSHAKMLQSHRNRVFHDFRSGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNSETYLHR
IGRSGRYGHLGLAINLITYEDRFSLYKIEQELGTEIQPIPSQIDRSLYVAPNASNEDGQI
QQSQQQNQQQKGLPTLPPTQQVMNAYAQPPPQPTFNQNQQQNNHHQYQQRSHRGGYNNNG
YYGNYRGRGGPPRGGVPRA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacgtctcaaacacaagaatctgaatggaaaaaccaaataagagcaccgcca
aaggatttacgcccgcaaactgaagatgttacaaatacaaaaggtggagaatgggaagat
tttggactcagaagagaattattaatgggtatttttgaagcaggttttgaaaaaccatca
cctatacaggaggaagctattccatcagctatagaaggcagggatattttagcaagagca
aaaaatggtacaggtaaaactgcatcattcgtcattccatctttagagaagataaacgta
cagaaaccaaaaattcaagctttgctattagtacctactagagagttggctttgcaaacc
tctcaagtatgcaaaacattaggcaaacatttaggtatacaagtcatggttaccacaggt
ggtactactttaagggatgatattatgagattagccgacccagttcacattttagttggt
acaccaggtagaatattagatttggcaagtaaaggagttgccaaccttgaagaatgtcca
acattcgttatggacgaagcagataaattattatcaccagagtttaccccagttatggaa
caattgttaggtcatttaccttcatctagacaagttatgttgttctccgcaacattccca
ttaattgttaaagactttaaagaaaaacatatgagaaaccctcacgaaattaacctaatg
gatgaattgacacttagaggtatcacacaatattacgctttcgttgaagagagacaaaaa
gttcactgtttgaacactttattctcaaaattacaaatcaatcaatcaattattttctgt
aattcaaccaacagagttgaattgttagcaaagaaggttacagaattgggttattcttgt
ttcttctctcatgcaaagatgttgcagagccacagaaatagagtatttcacgatttcaga
tcaggagtttgtcgtaatttagtttgttcagatttgttgacacgtggtattgatatccag
gccgtcaacgtagttataaactttgatttcccaaagaacagtgaaacatatttgcacaga
attggtagatctggtcgttacggtcacttaggtttagcaataaatttaatcacatatgaa
gatagatttagtttatacaaaattgaacaagaattaggtacagagatacaaccaattcca
tcacaaattgataggtcgctttacgttgcaccaaacgcaagtaatgaagatggtcaaatt
caacaatcacaacaacaaaaccaacaacaaaaaggtttacctacattaccacctacacaa
caagttatgaatgcatatgcacaaccaccaccacaaccaacatttaaccaaaatcaacaa
cagaataaccaccatcaataccaacaacgtagtcatcgtggtggatacaacaataatgga
tactacggtaattatcgtggtagaggtggaccaccacgtggaggagtgcctagagcttag
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