Wallemia mellicola: WALSEDRAFT_37239
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Entry
WALSEDRAFT_37239 CDS
T03142
Name
(RefSeq) putative U4/U6.U5 tri-snRNP-associated protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
wse
Wallemia mellicola
Pathway
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_37239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_37239
Spliceosome [BR:
wse03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
WALSEDRAFT_37239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
18472005
NCBI-ProteinID:
XP_006957670
JGI:
Walse1_37239
UniProt:
I4YEN3
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAKRNIESNLYLDTVNRHLLDFDFEKVCSVTLSNKSIYCCLICGKYYQGRSKTSAAYNHS
IDEEHHVYLGLDSKQFYILPENYKVDDNSLADILKVLEPSYESGDLDKLDSDLVGQDLNK
NDYLVGYIGLNNMSNNDYANVILNMLTHIRPLRNHFLLLNDCKTELLRRYSLFNKRVWND
KLFKSQVSPHEVLQLITKLSANKFNIQNSSDPVEFLTFLLNQLHKDLGGNKKPNSSIIYQ
LFQGQLRMTSQKIIQLDENEDINKKFIKEDKVTTINTPFLILSCDLPPKPVFNDNENIIP
QVSLGDVLKKYDGVTTQEHLGQSRQYKLTKLPKYLLIHFKRFSKNRFTSEYNQTIVNYPI
SGVDFKDYVDSTENINTVYDLVGNISHEHQATAGDDNNKSKWKCQLKSPMKNDDGSSKWF
QLQDLFVEEIDRRLIFLGETYLQVWQRRE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagaaatatagagagtaatctatacctcgatacagttaataggcatttatta
gatttcgattttgagaaagtctgtagcgttacactctcgaataagtctatttactgctgt
ttgatttgtggaaagtactaccaggggaggtcgaaaacgtcagctgcctataatcattca
attgatgaagaacatcacgtttatttgggtttggatagcaaacaattctacattctaccc
gagaattacaaagtcgatgataacagtttggccgatattttaaaagttttagaaccaagc
tatgagagcggcgatttggataagttagatagcgatcttgttggacaagatctgaataag
aatgactatttggttggatacatcggtttgaataatatgtcgaacaatgattacgcaaat
gttatattgaacatgcttacgcatataagaccactcaggaatcacttccttttgttgaat
gattgcaagaccgaattgctgagacgatactcactcttcaataagcgtgtttggaacgat
aagcttttcaaatctcaagtcagcccccatgaagtcttacaattgattaccaaactgtct
gctaataagtttaacatccaaaattcatcagatccagtggagtttttgaccttcttactc
aatcaactacacaaggatcttggtggaaacaaaaaacctaattctagtataatttaccaa
ctattccaaggtcaattgagaatgacgtcccagaagatcattcaattggatgaaaatgaa
gacataaataaaaagttcattaaagaagataaagtcacaacaatcaatacaccattctta
atattgagttgtgatttaccacctaaaccagttttcaatgataacgaaaatattatacca
caagtcagtttgggtgatgtactgaaaaagtatgatggtgttaccacgcaagaacaccta
ggtcaatcgaggcaatacaagttgacaaaattacctaaatatctacttatacattttaaa
aggtttagtaagaatagatttacaagtgaatacaatcagactatagttaattacccaatt
tccggagttgatttcaaggattatgtcgatagtacggaaaacatcaacactgtttatgat
ctcgttggcaatatttcacatgaacatcaagcgaccgctggtgatgataacaataagagc
aaatggaagtgccaactgaagtcaccaatgaagaatgatgatggtagtagtaaatggttc
caacttcaagatttattcgttgaggagatcgacagaaggttgattttccttggtgagaca
tacttacaggtatggcaaagaagagagtag
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