Wallemia mellicola: WALSEDRAFT_40048
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Entry
WALSEDRAFT_40048 CDS
T03142
Name
(RefSeq) putative delta DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
wse
Wallemia mellicola
Pathway
wse03030
DNA replication
wse03410
Base excision repair
wse03420
Nucleotide excision repair
wse03430
Mismatch repair
wse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WALSEDRAFT_40048
03410 Base excision repair
WALSEDRAFT_40048
03420 Nucleotide excision repair
WALSEDRAFT_40048
03430 Mismatch repair
WALSEDRAFT_40048
03440 Homologous recombination
WALSEDRAFT_40048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wse03032
]
WALSEDRAFT_40048
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_40048
Enzymes [BR:
wse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WALSEDRAFT_40048
DNA replication proteins [BR:
wse03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
WALSEDRAFT_40048
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
WALSEDRAFT_40048
MMR (mismatch excision repair)
DNA polymerase delta complex
WALSEDRAFT_40048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_exo2
RNase_H_2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18472151
NCBI-ProteinID:
XP_006959614
JGI:
Walse1_40048
UniProt:
I4Y8R5
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSNPINKKRKITDDTKSIKQASQGDKKQSTFADILESLQDEAEKNSTESSQVWGRPSVPK
FESMVEPIIFQQIDLEEASIPGAEPFIRMHGVTQDGYSVMANVTGFLPYLYIAAPRGFTK
EECEGFSGYLNATFGNNGKRIVADMEMHTKRSLWGYKGDEKSPFIKITFVDQRSMTRVRG
CFERGEIHFREFFDDAIQTYESNISYDLRFMIDKKVVGMSWIECPGGAYNLKASTSKVSK
AQLEFDIHHKDIIAHPAEGEWQKMAPLRILSFDIECAGRQGIFPEAQIDPVIQIANMVTR
QGESKPFIRNVFTLKSCAHIAGSQVLSFEDESKMLNAWRDFVEEADPDVVIGYNTSNFDI
PYLMDRAKALKATKFCYLGRMKNVKSEVGTSHFSSKAYGTRDSKTTNMEGRLQLDLLQLI
QREHKLRSYSLNSVCAEFLGEQKEDVHHSIITELQNGTPESRRRLAVYCLKDAYLPQRLL
DRLMSLVNQTEMARVTGVPFNYLLAKGQSIKVMSQICRQAQVHGYLVPALRVEGSDEQYE
GATVIEPRRGYYDVPITTLDFSSLYPSIMMAHNLCYTTLLDPQTVERLKLKEGEDYIKTP
NNDMFVTPVKRKGLLPVVLQDLISARKRARADIKSEKDPFRRAVLDGRQLALKVSANSVY
GFTGATIGKLPCLPISSSTTAYGRRMIERTKEEVESHYKVSNNYSHDAEVVYGDTDSVMI
KFGCRDLETAMKLGAEAAGVISSKFPNPIKLEFEKVYYPYLLINKKRYAGLYWTGLEKYD
KMDTKGIETVRRDNCRLVGTVITTCLHKMLIDRDVKAAEDYTKHVISELLQNKIDMSQLV
ITKALTKTEYDAKQAHVCLAERMRKRDAGSAPALGDRVAYVIVKGSKGAAAYERSEDPLF
VLENNVPIDTKYYLENQLSKPLLRIFEPILGEKSQSLLTGDHTRTITVATPSIGGLMKFA
VKTVTCLGCKAPIRGSDAAVCKNCKGKAGELYQKQVASVSALQVQFARLWTQCQRCQGSL
HQDVICTNKDCNIFYMRQRSKFEVASAVNTLERFNDDNSW
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccaataaataagaagaggaagatcacagacgatacaaaatcaatcaagcag
gcttcacagggcgataagaagcagagtacttttgctgacatcctagagagtttacaagat
gaagcggagaagaattcgacagaaagtagccaggtttggggtagaccgtctgtgccaaag
tttgagtccatggttgagccaataatattccaacaaatcgacctcgaagaagcctcaata
ccgggtgcagaaccattcattcgcatgcacggtgtcactcaggatggctactctgtcatg
gcaaacgtcaccggtttcctcccatatctctatatagctgcacctcgcggattcacgaag
gaagaatgcgagggcttttcaggatacctcaatgcaacttttggaaacaacgggaagaga
atagtcgcagatatggaaatgcacactaagcggagtctatggggatacaagggcgatgag
aagtcaccatttatcaagatcacattcgttgatcagaggagtatgacacgcgttcgagga
tgcttcgaaagaggtgaaattcacttcagagagttctttgatgatgctatccagacctac
gagtctaacatctcctatgatcttcgcttcatgatcgacaagaaggttgtgggaatgtca
tggattgagtgtcctggaggtgcttacaaccttaaagcgtctactagcaaggtatccaaa
gctcagctcgagtttgacattcaccacaaggatattatagcccaccctgcggaaggcgag
tggcagaagatggcgccattgcgtatactgtctttcgatattgagtgtgctggtcgtcaa
ggtatattcccagaagcccagattgatccggttatccaaatcgccaatatggtcactcgc
cagggtgaaagcaagccattcatcagaaatgtctttactctcaaatcttgtgcccatatc
gcaggtagtcaagttttaagtttcgaagatgagagcaaaatgcttaatgcatggagagat
ttcgtagaggaggctgatccagatgtcgtcatcggttataacacctcgaatttcgatatt
ccatacctcatggacagagcaaaggctttgaaagcgacaaaattctgttacttgggtaga
atgaagaacgtgaagagtgaagttggcacatcccacttctcatcaaaggcgtatggtacc
agagattcaaaaacgacaaatatggaaggccgtctacaactagacttgctacagctcata
caaagagaacacaagctaagatcttactctttgaatagcgtctgtgcagaattccttgga
gaacagaaggaagatgtacaccactctattattactgaattgcagaatggtacaccagaa
tcaagacgaagattggctgtatactgtctaaaggatgcttatctaccacaaagattgctt
gacagactgatgagtttggttaatcagactgaaatggcaagggtcactggtgtacctttc
aactacctccttgctaaaggtcaatcaattaaggttatgagtcagatatgtagacaagct
caagttcatggttacttagttccagctttgagagttgaaggttctgacgaacagtacgaa
ggtgctactgttattgaaccccgcagaggttattacgatgtaccaattacgaccctcgat
ttcagttctctgtatccatctattatgatggctcacaatctctgctataccaccctctta
gatccacaaacagtagaacgtctcaaattgaaagaaggtgaggactacatcaagacgcca
aacaatgatatgtttgtcactccagtcaaacgtaaaggtctcctgcctgtagttttgcaa
gatcttatttctgcacgtaaacgcgccagagcagacatcaagagtgagaaagatccattt
agaagggctgttcttgatggtcgtcaattagctttgaaggtttctgcgaactctgtatac
ggtttcactggtgcgacgatcggtaaattaccttgcctacctatctcatcttcaacgact
gcttatggtcgtcgcatgattgaacgtacgaaggaagaggttgaatcacattataaggtt
tcaaataactactctcatgatgctgaggtcgtgtatggtgatacggattctgtcatgatt
aagttcggttgcagagatctagagactgctatgaaacttggcgccgaagccgctggtgtt
atctcatcgaagttcccaaatcctattaagttagagttcgagaaggtttactatccatat
ctactcattaataagaagagatatgctggattatactggactggtttggaaaagtatgat
aaaatggatacgaagggtatagaaactgtccgtcgtgacaattgcagacttgttggtacg
gtaattactacctgcttgcacaaaatgttgatagacagagatgtgaaagcagcagaagac
tacacaaagcatgttatctcagagcttttgcaaaataagatcgatatgagtcaactagtc
atcacaaaggctctgaccaagacagagtacgatgccaaacaggctcacgtatgtctcgct
gagcgtatgcgcaagcgtgatgctggatcggcaccggcactcggtgatcgtgtcgcatat
gttattgtgaaaggtagtaaaggagcagcagcatatgaaagatctgaagatccactcttc
gttctcgagaacaatgtccctatagataccaagtattacctcgagaatcaactatcgaag
cctttgttaagaattttcgaaccaattctaggagaaaagtctcagtcattgttgacaggt
gatcatacccgtactataaccgtcgcaactccaagtataggaggactgatgaagtttgcg
gttaaaacagtaacatgtttgggatgtaaagcgccaattaggggtagtgatgctgctgta
tgcaagaattgtaaaggcaaagcaggagaattataccaaaagcaagttgcttctgtatcc
gcattacaagtccagttcgctagattgtggacacagtgtcagagatgtcaaggtagttta
caccaagatgtcatttgcacgaataaggattgcaacattttctatatgagacaacggtct
aagtttgaagtagcaagtgcagtcaacactttggagagattcaacgacgataattcatgg
taa
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integrated database retrieval system