Wallemia mellicola: WALSEDRAFT_40107
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Entry
WALSEDRAFT_40107 CDS
T03142
Name
(RefSeq) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
wse
Wallemia mellicola
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wse03016
]
WALSEDRAFT_40107
Enzymes [BR:
wse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
WALSEDRAFT_40107
Transfer RNA biogenesis [BR:
wse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WALSEDRAFT_40107
Prokaryotic type
WALSEDRAFT_40107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
18472154
NCBI-ProteinID:
XP_006959649
JGI:
Walse1_40107
UniProt:
I4Y8V1
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MDKNVSAVSGIIKHRFTDFFVNEIDKKDNVVRLTDIGLPEDELVESREKARLEAEKLDVK
SWPEDATERLTPKLGPTVTEKIKELTLKGPSDEIVMTNPLGDDKEARKEVHDLLRAVLGG
RFETSSTQSSEISIKWCRGGRPRREQHPYDKEKPYIHFVLQKSNRDSSDAVNHLSRMIKV
KDKLMNVAGTKDKRGITTQRLCIKRGNMTLQDVWKRVNNAGTENQKEKKKVRRTIQEALQ
ERGERGCRIGNLTYESENFALGDLNGNRFGIILRDVESDGEDTINASLKVLAERGFINYF
GMQRFGTSVIPTHYIGWLLLNSDWEGACDSILRLRPNEDDDCVKGRKAWLDDKNGKEALK
LLPRKMVAERAIIEHLHKSNRDFLGALSRIPRNLRTMYVHAYQSYIWNSVVSERMRTFGL
KVVAGDVVSAGEDVKRVEEGEEDKYSIYDVLMPLPGHGVLYPTGKLGEKYKEMLEMDHLD
YQKLWRPQKEFSMEGGYRKIVHLPKDVTWSVIQYASDDEQLLKSAEEELLGLDLETVEGE
RKHTAVSMAFNLGSSTYATMLLREVLKGNEKRNHS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaatgtttcagctgtatccggtatcatcaagcaccgtttcaccgatttcttt
gttaatgagattgacaagaaggataacgtcgtcagattgactgatattggcctcccagag
gatgaactcgtcgaatcacgtgaaaaagcacgtttagaggctgagaaattggatgtaaag
tcatggccagaagatgctactgaaaggctcacgccgaaacttggtcctaccgtaacagaa
aagattaaggagctcaccttgaagggtccttccgatgaaatagttatgacaaatccactt
ggtgatgacaaagaagctagaaaggaagttcatgacctgctgagagccgttttaggtggt
cgttttgaaacgtcttcaactcaatcatcagaaataagtattaagtggtgtagaggtggt
agaccacgtagagagcaacatccttacgataaagaaaagccatatattcactttgttttg
caaaaatcaaacagagattcgtcagatgcagtgaatcacttatccagaatgataaaagtc
aaagacaagcttatgaacgtagcaggtactaaagacaagcgtggtatcaccactcagagg
ttatgtattaaaaggggcaatatgacattacaagatgtctggaagagagttaataacgca
ggtaccgaaaaccaaaaggaaaagaaaaaggttagaagaaccatccaggaggcactccaa
gagagaggtgaaagaggctgcagaattggaaatttaacctacgagtctgaaaatttcgca
cttggagacctcaacggtaacagatttggtattattttgagagatgtcgaaagtgacggt
gaagatacgatcaatgcatcattgaaagtccttgcagaaagaggattcatcaattacttt
ggtatgcaaagattcggtacatcagtgattcctacacattatattggatggctactcctc
aactcagactgggaaggcgcatgtgatagcattttacgtcttagacctaatgaagatgat
gattgcgtgaaaggaagaaaggcgtggttggacgacaagaatggcaaggaagcactcaag
ttgttaccaaggaagatggttgctgagagagcgattatcgaacacctccacaaatcaaac
cgtgatttccttggtgcattgtccagaatacctcgtaatttgcgtactatgtacgtacac
gcatatcaatcatacatctggaattctgttgtcagtgaaagaatgagaacattcggactc
aaagttgttgcaggagatgtagtttctgcaggtgaagatgtcaagagagtagaagaaggt
gaagaagacaaatacagcatatatgatgtcttgatgcctttaccaggacatggtgttttg
taccctactggtaaactcggtgaaaagtataaggagatgcttgaaatggatcacctggat
tatcagaagttatggagaccacagaaggaattctcaatggagggtggatatcgaaaaatc
gtacatcttcctaaagatgttacgtggtctgtcatccagtatgcgtcagacgatgagcag
ttgttgaagtcagcagaggaagaactcctaggattagatctcgagactgtagagggtgaa
agaaaacacaccgcagtttcgatggcgttcaatctaggtagcagtacatatgctacaatg
ttgttacgtgaagtactcaaaggaaatgagaagagaaaccattcatga
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