KEGG   Wallemia mellicola: WALSEDRAFT_43168
Entry
WALSEDRAFT_43168  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
wse  Wallemia mellicola
Pathway
wse03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    WALSEDRAFT_43168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wse03021]
    WALSEDRAFT_43168
   03036 Chromosome and associated proteins [BR:wse03036]
    WALSEDRAFT_43168
Transcription machinery [BR:wse03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     WALSEDRAFT_43168
   Coactivators
    SAGA/TFTC/STAGA complex
     WALSEDRAFT_43168
Chromosome and associated proteins [BR:wse03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     WALSEDRAFT_43168
    STAGA complex
     WALSEDRAFT_43168
    TFTC complex
     WALSEDRAFT_43168
    SAGA complex
     WALSEDRAFT_43168
    SLIK complex
     WALSEDRAFT_43168
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz TFIID_NTD2 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SPT8 WDR90_beta-prop_4th WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_Vps41 LisH TSA Beta-prop_RIG_1st Nucleoporin_N
Other DBs
NCBI-GeneID: 18472275
NCBI-ProteinID: XP_006956569
JGI: Walse1_43168
UniProt: I4YGT3
LinkDB
Position
Unknown
AA seq 764 aa
MTDSAKHHDIILDYLRRKGFTGAEEALKHDLTAQGLPAKSDSHVQSLEELAAASASALKK
KEGEETPSGPSKDGVMNELVNIASNGQLGKQTVDRLLLTDPTERERGYRDLDRWVEGSLD
VYRPQLRPILFPIFVHTYLDLISLSFQKSARAMLHRHAHSLIPYHGDIIAHLGSLTLPAH
VKSDPLAIRWRSQKYIVRLGKAAWNLLLGWLSDALVGGPGGSSTGGTAESKGRALMLKIV
NERLRVDVVESATKISQEMIEESTGLISDLTITYPTVPGQRMAIAQSAQSFNNIIGELKL
GLPPLDDGLRAEVDHQVAVTDNLNREEGMEIDQQTPAVQPAQSQQQSEQGAQSQSGEANT
NQEAAAAGEIRDSNNLLAPTRADLPPLPVFRTADVRREVEKVFDSRKRINLGVEMEKNTN
GVEETMKAKITLPSICAFTLQDVGDQLNCTSFSPDSSILAGGLSDSTVRLWNLKGESFMG
LREDYDREKPPSSMKRLKLDTGAKDLKFVGHSAPVFGLSFDPSFGSPVQPRHLISSSADA
TVRLWSLETYSNLAVYRGHRDPVWDCEWGPYGIYFATGSRDRTARLWSAERPNALRIFAG
HLGDVETVKFHPNSLYLATGSTDRTARLWDVQRGACVRIFIGHQAPLSTLALSPDGKYLA
SASDDLSISLWDLGSGRRIKKMLGHTAQINSLNFDANSNMLISAASDCSIRCWDILSANT
ERPDSTTSDLLETFYSKNSPAYDVKFTPRNLCLAALDGGNIAAD
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgacagatagtgcaaaacatcatgatataattctcgactatctccggcggaaaggcttt
accggggctgaggaagcactcaagcacgatttaacagctcagggtttaccagcaaaatct
gattcacacgtacaatcattggaagagctcgctgcagcttcagcttcagctttgaagaag
aaagaaggcgaggaaacaccttctggaccatcaaaagatggcgttatgaatgaactcgtt
aatatcgcatcaaatggtcaacttggaaagcagactgtcgataggttactcctcactgat
ccaactgaacgtgaacgcggttatcgcgatttagatagatgggtcgaaggcagtttagac
gtttacagacctcaattgcgtcctatccttttccctattttcgtacacacttatttagac
ctcatcagtttgtcattccagaaatcagcaagggcaatgttgcacagacacgcacacagt
ttgataccataccacggtgatattattgctcacctaggtagtcttacattgccagctcac
gttaagtctgatccactcgctatcagatggagatctcagaagtatatcgttagactaggc
aaagcagcctggaacttgttattaggatggcttagtgatgctctcgttggtggtcctggt
ggtagttccactggtggcactgctgaatccaaaggacgtgcactcatgttgaagattgtc
aatgagagattaagagtagacgtcgtcgaaagtgctacgaagattagtcaggaaatgatc
gaagaatctaccggtttgatttctgatcttacaattacatatcctaccgtcccagggcaa
agaatggccattgcacaatcagctcaaagtttcaacaatatcattggagagttaaaactc
gggttaccaccattagacgatggtttgagagccgaagtagatcaccaagtagccgtaacc
gacaatttaaaccgtgaagaaggtatggagatagaccaacaaactccagcagtacaacca
gcacaatcgcagcaacaatctgaacaaggggctcaatcgcagagtggtgaagctaatact
aatcaagaagcggcagccgctggcgaaataagagatagtaacaatttacttgcacctacc
agggctgatcttccacctttacctgtttttagaactgcagacgtaagaagagaagtcgag
aaggttttcgatagcagaaaaagaataaaccttggtgttgaaatggagaaaaataccaat
ggagttgaggaaacgatgaaagccaaaataacattaccttcaatttgcgcattcacgttg
caagacgttggtgatcaattaaattgtacatcattttcaccagattcatctatcttagcg
ggtggattatctgattcaacagttcgattgtggaatctcaaaggtgaatcatttatgggt
ttgagagaggattatgatagagaaaagccaccttcttcaatgaaaagattgaaattagat
acaggtgcgaaagacttgaagttcgttggtcactcagctccagtatttggtttatcattc
gatccaagctttggttcaccagttcaaccacgtcatcttatcagtagttctgcagatgca
acagtcagattatggagtttagaaacatactcaaatttagctgtatacaggggtcataga
gatccagtatgggattgtgaatgggggccttatggtatatacttcgctactggatctaga
gatagaactgcacgtttgtggtctgctgaaagaccaaacgcattgcgtatatttgcagga
catcttggtgatgttgaaactgttaaattccatccaaattctttatacttagcaacaggt
tcaactgatcgtacagcaagattatgggatgtacaaagaggtgcatgtgtgagaatattc
attggtcatcaagcaccactttcaactctcgcactcagtcctgatggaaaatatctcgct
agtgcatcagatgatctctcaattagtctttgggatttaggtagtggaagacgtataaag
aaaatgttgggacatactgcacaaatcaatagcttaaactttgatgctaactctaatatg
cttattagtgctgcctccgattgctcaattagatgttgggatattcttagtgctaacaca
gaacgtccagatagtacaactagtgacctacttgaaacgttctactcaaaaaatagtcca
gcttatgatgtaaaattcacaccacggaatctttgtttggctgcactagatggtggaaat
atagcagcagactaa

DBGET integrated database retrieval system