KEGG   Wallemia mellicola: WALSEDRAFT_43388
Entry
WALSEDRAFT_43388  CDS       T03142                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K15542  polyadenylation factor subunit 2
Organism
wse  Wallemia mellicola
Pathway
wse03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    WALSEDRAFT_43388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_43388
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     WALSEDRAFT_43388
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N DSE1_N Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th CFAP251_N Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st ASA1 Beta-prop_SCAP eIF2A PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_VPS8 PROPPIN
Other DBs
NCBI-GeneID: 18472284
NCBI-ProteinID: XP_006956718
JGI: Walse1_43388
UniProt: I4YH91
LinkDB
Position
Unknown
AA seq 499 aa
MIDLLENLSNKANKQPTKQPRWHPYRIHEQPKPAYVDPTMAQKEANALGAVYQLGVDSRK
PKKTIERRTVEYAGSLAAWNKERRSISTAYPNQFLRPGLDHIVELRPPEAYSNPATSIAA
KFVQASVNKIKCSINVVAWTPDGRRLLTGCHSGEFVLWNGLTFNFETILQAHDSSIRALA
YTYSGDWIISADSAGTLKYFNPAMNNVAAWQAHGNKDTGMDTAIRGVAVSPTDQHFVTAS
DDQTLKVWAFGERREERTLTGHGWDVKCVDWHPHKGLIMSGGKDNLVKFWDPRRESDLTT
LHGHKNTVQTCRFSPDGLLAATGSRDQSVRVFDLRAMKDLAVLKGFEREVCSLAWHPIHP
MLVTGTATGAMVYHSLAHPHDPKSTINPIASVDWAHESSVWSMAWHPLGHLMASGSNDYT
TRFWERERPGRAVGRDKFHLGPMTEDEERELLQGPTISPNVSKADDEDLPLPGLGNTNTG
IKSIYAVGPIEGPLPGFDG
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgatagatttattagaaaatctatcaaataaagctaataagcagccaactaaacagccc
agatggcatccttatcgcatacacgagcagccgaagcctgcgtatgtcgaccctactatg
gcgcagaaggaggcgaatgcattaggcgcggtctaccagctcggtgtagactcgcgcaaa
ccaaagaagacgatagagagaagaacggtagagtatgcaggctctttggctgcatggaac
aaagagcgtagatcaatatcgaccgcctatccgaatcagttccttaggcctggcttggat
cacatcgtcgagttaagaccaccagaagcatatagcaatccagctacatccatcgctgca
aagttcgtacaggcgtcagtcaacaagatcaagtgctcaatcaacgtagtagcctggaca
ccagatggcagacgtctcctcactggttgtcattccggcgaattcgtactttggaatggt
ctgacattcaacttcgaaactatcttacaagcccatgattcctctatcagagcgttagcc
tatacctactccggtgactggattatatctgctgactctgccggtacactcaagtatttc
aaccctgcgatgaacaatgtcgcagcttggcaggcacacggtaacaaggacactggtatg
gatactgcgattaggggtgtagcagtatcaccgactgatcaacacttcgtcactgcgtct
gacgaccaaacactcaaagtctgggcattcggtgaacgccgtgaagagcgtactctaaca
ggacacggttgggatgtcaagtgtgtggactggcatccacataaaggtttaatcatgagc
ggtggtaaagacaacctcgttaaattttgggatccaaggagggaatcagatttgacgaca
ttacatggtcacaagaatacagtacaaacgtgtagattctcacccgatggtctccttgcc
gctacaggctcccgcgaccagagtgtcagagtgtttgaccttcgcgcgatgaaagatctc
gcggtattgaaaggtttcgaaagagaggtctgctcactcgcatggcatccaatacaccct
atgcttgttactggtacagctacgggtgcgatggtataccactctctagctcatccgcat
gatccgaagagcacgatcaatccgatagcatctgtcgattgggcacatgagtcaagcgta
tggtctatggcttggcatccgcttggccacttgatggcctccggttcaaacgactatact
acacgtttctgggagcgtgaaagacctggtagagccgtcggcagagacaaattccatctc
ggtccaatgacggaagatgaagagagagaactcttacagggaccaacaatatctcctaac
gtaagcaaggcagacgacgaagatttacctcttcctggtctcggaaacactaatacagga
atcaaaagtatatacgctgtcggtccaatagaaggccctctacctggattcgatggttaa

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