Wallemia mellicola: WALSEDRAFT_48643
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Entry
WALSEDRAFT_48643 CDS
T03142
Name
(RefSeq) LSM-domain-containing protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_48643
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_48643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_48643
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_48643
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_48643
mRNA degradation factors
5'-3' decay
Lsm complex
WALSEDRAFT_48643
Spliceosome [BR:
wse03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
WALSEDRAFT_48643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
18472461
NCBI-ProteinID:
XP_006960234
JGI:
Walse1_48643
UniProt:
I4Y6Y4
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MASQILPLELIDKCIGSRIWVIMKNEREFVGTLQGFDDFVNMVLDDVTEYDISPDGTQKK
SKLRQTLLNGNNVCMLLPGGEGPESVQ
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcagatattgcctttagaactcattgataagtgcattggtagcagaatatgg
gtaattatgaagaatgagcgtgaattcgttggtactctgcagggatttgatgacttcgtt
aatatggtccttgacgatgtaacagaatatgacatatcgcctgatggtacacaaaagaaa
tcaaaacttagacaaacgctactcaacggtaataatgtctgtatgttgcttccaggtgga
gagggaccagaaagtgtacaataa
DBGET
integrated database retrieval system