KEGG   Wallemia mellicola: WALSEDRAFT_48643
Entry
WALSEDRAFT_48643  CDS       T03142                                 
Name
(RefSeq) LSM-domain-containing protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
wse  Wallemia mellicola
Pathway
wse03018  RNA degradation
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_48643
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WALSEDRAFT_48643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_48643
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_48643
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     WALSEDRAFT_48643
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     WALSEDRAFT_48643
Spliceosome [BR:wse03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    WALSEDRAFT_48643
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 18472461
NCBI-ProteinID: XP_006960234
JGI: Walse1_48643
UniProt: I4Y6Y4
LinkDB
Position
Unknown
AA seq 87 aa
MASQILPLELIDKCIGSRIWVIMKNEREFVGTLQGFDDFVNMVLDDVTEYDISPDGTQKK
SKLRQTLLNGNNVCMLLPGGEGPESVQ
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcatctcagatattgcctttagaactcattgataagtgcattggtagcagaatatgg
gtaattatgaagaatgagcgtgaattcgttggtactctgcagggatttgatgacttcgtt
aatatggtccttgacgatgtaacagaatatgacatatcgcctgatggtacacaaaagaaa
tcaaaacttagacaaacgctactcaacggtaataatgtctgtatgttgcttccaggtgga
gagggaccagaaagtgtacaataa

DBGET integrated database retrieval system