Wallemia mellicola: WALSEDRAFT_58249
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Entry
WALSEDRAFT_58249 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
wse
Wallemia mellicola
Pathway
wse03015
mRNA surveillance pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
WALSEDRAFT_58249
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_58249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_58249
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_58249
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
WALSEDRAFT_58249
mRNA cycle factors
Stress granule specific factors
WALSEDRAFT_58249
Spliceosome [BR:
wse03041
]
Complex C
Other components
Complex C specific factors
WALSEDRAFT_58249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
18473000
NCBI-ProteinID:
XP_006959677
JGI:
Walse1_58249
UniProt:
I4Y897
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSYHPIVKEPKLALKGYNSNTTNEQDIANELQGCLPLRICLNYDSEDVEANVEFKMLESA
EKAFTLYRNLRFSDKNIELLPYDDNNNLITHIPQSISTPKIFRNLPTTITPDAVYNLTRL
YGPIHSIRMINAGVAVVEAWDEDTANNLESEMHCSDVDGQLISVTTYIPPHTNELQPKAS
AFVPQHQKKHGLVTPLPNSPGSYFGHGPGQQVQYTGTNLVDPCNLFVKNLDHSLESNNLF
DHFKSYGHIVSARVMRDENDNSRGFGFVSYQFPESAKTALHAMNGVTIGSKSITVRFHEP
KQLRQEKLAAKFAKSGDRLTPSLGLQTPISPVPSDYGGMDNYLTSPPLSTTPLGQRRGSG
SYFKAALGAEVIPSLEEFKAMTLPMRNEILAGHMARILSQNGLGEMEVIDKLLINNKLED
LVILLNDNDALIERSQQVQQEMNNLNVGLNALRIDQGGASRAGSMISQSGYISQQSEKER
LIMSVQNLGEPDSEKIGEMLNSLGKKERALCLFSNDYLIQKVRDARVLMEAMEGDDDEAK
PEMKTEENQNMTAAEVLEKAIKEKTIYDEELYKQTVDYYNSLAHLEVKTQKQKIGENLFK
QIKLNGFKSNIAKLTIKILDNEDLKSLILLIKIYPEYLNLIICKY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccacccaatagtaaaagagccaaaattggcgttgaagggatataattctaat
accacaaacgaacaagatatcgctaatgaattacaaggttgtctgcctttaagaatatgc
ttaaattacgattcagaagacgttgaagctaatgttgagtttaaaatgttggagtcagct
gagaaagctttcactctttacaggaatcttcgcttctctgataagaatatcgaattgtta
ccctacgacgataataacaatctaattactcatataccacaatcaatatcgactccaaag
atattcagaaatttaccaacaacaatcacgccagatgctgtatacaatttgactagatta
tacggcccaatacattcaatacgcatgataaatgccggtgtagccgtagttgaagcatgg
gatgaggataccgctaataatttggaatctgaaatgcattgttcagatgtagacggtcaa
ttgatcagcgtaactacgtatatacctccacacacaaacgagttacagcctaaagcttct
gcttttgttccgcaacatcaaaagaaacatggtttggttactccattaccaaattctcca
ggtagttacttcggtcatggtcctggtcaacaagtacaatatactggtacaaaccttgtc
gacccttgcaatcttttcgtcaagaatctcgaccactctttagaatcaaacaacttgttt
gatcattttaaaagttacggtcatattgttagtgcaagagttatgagagacgagaatgac
aattcgcgtggatttggtttcgtttcttaccaattcccagaatcagccaaaacggcttta
catgccatgaatggtgttacaatcggttcaaaatcaatcacagttagatttcatgaacct
aagcaattacgtcaagagaaattggcagcgaaattcgccaaatctggtgatagacttaca
ccatcacttggattacaaacaccaattagtccagtaccatcagattatggtggaatggat
aattatttaacatcaccaccattatcaacaacaccattaggccaaaggcgtggatcaggt
tcatactttaaagcagcattaggtgcagaagttataccatcattagaagaatttaaagca
atgaccctaccaatgagaaatgaaattttggcaggacatatggcacgtatactcagtcag
aacggtttaggtgaaatggaagtgattgataagttgttgattaacaacaaattggaagat
ctcgtcattttacttaacgacaatgatgctttaatagaaagatcacaacaagttcaacaa
gagatgaataaccttaacgttggattaaacgccttgaggatcgatcaagggggtgcatcc
agagctggcagcatgatatcacaaagtggatatatatcacaacaaagtgagaaagagagg
ttaattatgagtgtccaaaacctcggcgaaccagatagcgaaaagattggagaaatgctc
aacagtttgggcaagaaggagagggctttatgcttattctctaatgattacttgatccaa
aaagtcagagatgctagagtactcatggaagccatggaaggtgatgatgatgaggccaaa
ccagaaatgaagaccgaagagaaccagaatatgacggctgctgaggtattagaaaaggct
atcaaagagaagacaatatatgatgaagagctgtacaagcagacagttgattattacaat
tcactcgctcatttggaagttaaaacacaaaaacaaaaaattggtgagaacctcttcaag
caaataaaattaaacggctttaagagtaatattgcaaaattaacaatcaagattctggac
aatgaagatcttaagtcattgattttattaataaaaatatatccagagtatttgaattta
attatttgtaaatattag
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