Wallemia mellicola: WALSEDRAFT_58603
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Entry
WALSEDRAFT_58603 CDS
T03142
Name
(RefSeq) SNF5-domain-containing protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
wse
Wallemia mellicola
Pathway
wse03082
ATP-dependent chromatin remodeling
wse03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
WALSEDRAFT_58603
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
WALSEDRAFT_58603
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
wse01009
]
WALSEDRAFT_58603
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_58603
03036 Chromosome and associated proteins [BR:
wse03036
]
WALSEDRAFT_58603
Protein phosphatases and associated proteins [BR:
wse01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
WALSEDRAFT_58603
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
WALSEDRAFT_58603
SWI/SNF complex
WALSEDRAFT_58603
Chromosome and associated proteins [BR:
wse03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
WALSEDRAFT_58603
PBAF complex
WALSEDRAFT_58603
SWI/SNF complex
WALSEDRAFT_58603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
GATA
Motif
Other DBs
NCBI-GeneID:
18473036
NCBI-ProteinID:
XP_006960268
JGI:
Walse1_58603
UniProt:
I4Y718
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MDTASVDEKNKSKIRQWDSSDDNYLKLLSNDSRLYNSISKSSLKQPSVDNYKLSKPKYQW
FERPEKDPPLALDSKVKLLYPKDTNNLVDQIRNKLSISPPIRFQKFHYKDAAQVNEELVP
IRLDFDQDYLRLKEVFCYNLKEPHITPKLLAISLCHDFGLNEYTAAHHIEKAIIDQLDEW
KSNVHEYLNMHGPSTSTNVGLLDQSELNWWNSIKNDSIPDDINVKEELDTNIDQELEEDI
RILIKLDIVHPPNHLIDQFEWPLSTSLQEDAPELFATNFALELGLPGEFITSISHNIREQ
SSFYLKSLSKLNHPIDEKDSLLKIPDEDFRKSFLPQLIDHQLERTPRDAAEFTPKLEPVS
SEDLITYEKDLEKDNRRRKRLQKNRKTNSSILTQDREPIKTFRTLPQFPETYISVPHSFL
KDQPVVGGNNQNNQQLPTNYPRRAAAAKASLNISTSAQAELADIDNNPEDEDYGGEDSHF
DNFNSTMQFNEEENRYVQKPLQIQPFDQSKMAITKRPRFIQEVPTKIDYNPIPRLREGAK
MFTTGNNKAMKYGHGIAFKKDLSPGVEVKKLSAATINIYSYFSTENQHENIINGIWHCSN
CGVPEMYAIGRRKGPMGDKSLCGECGKYLHKMRKNKPVVYNNDPEYHKGLREQMERENEE
RNQLQKANAQRYRKEMKASRQAQKVAKEAEQLDFYSNSHKRKQDLDFSDEDDTFEYKRGK
RKSIDDDEDDDDYNEGEEEKGLPQTRSQRHRQVQLPPQPSPTSSQSEAFGDTSKTRQSQS
TPTWLSEAAKQLRLKYPNDQFIIVEKPSQAGEVQEWRIKCLDCPGKMYTPGPGMTVENFE
KHLKNRQHKQKLMARLGITDGLSPLNGPSTSLSPMSHPHQQGLNPLSRPSSSHQTPMQVA
MSQAPSQQTDILAAAMQHASSQHDQPAPQQSQGPSQLYNQEQFINIPHDLPSDLSNDLPG
DLPNSLDISNIDMDMIGLPSFDFNSQNDDQSQF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacactgcatctgtggatgaaaaaaataaaagtaaaatacgccaatgggattcgtct
gatgataattacctaaagctactatcaaatgatagcagattatataactctatatcaaag
tcatcgctaaagcaaccttccgtagataattacaaactatctaaacccaagtatcaatgg
tttgaaaggccagagaaggatccacctttggctttagatagtaaagtcaagctactctat
ccaaaagatacgaataacttggttgatcaaattcgtaataaattatctataagtccacct
attagatttcagaagttccattacaaagacgctgctcaagtgaatgaggaattggtccct
attaggttggattttgatcaagattatttgagattaaaagaagtattctgttataatctc
aaagagccacatattaccccaaaattgttggctatctcactatgtcatgacttcggttta
aacgagtatactgcagcacatcatattgagaaagcaatcattgatcaattagatgaatgg
aaatctaacgtacacgaatatttgaatatgcacggtccttctacttcaactaatgtggga
ttacttgatcaatccgaattaaattggtggaattctataaaaaacgatagcatacccgat
gatatcaacgtcaaagaagagcttgatactaatatagatcaggaacttgaagaagatatc
agaatactgataaaattggatatagtacatccaccaaatcatctaattgatcaatttgaa
tggccattatcaacctctttacaagaggatgcccctgaattattcgcaactaatttcgcc
ctagaattaggtctaccgggtgaattcattacatcaatttctcataatatacgcgaacaa
tcatcattttatttgaaatctttatcaaaattaaatcacccgattgatgagaaggattca
ctattaaaaatacctgatgaagacttccgtaaatcattcttgccccagttgatagatcat
caattggaaaggacaccgagagatgctgcagaatttacaccaaaattggaaccagtatct
tctgaagatttaattacttatgaaaaagatttagaaaaggataatagaaggcgtaaaaga
ttacagaagaatcgcaaaactaattcatcaattttgacacaagatagagaaccaataaag
actttcaggacattaccacagttccctgaaacgtatatatcagttccacattcattcttg
aaagatcaaccagtagttggaggaaataatcaaaataatcaacaattaccaactaattat
ccaagacgcgctgctgctgctaaagcaagtttaaatatatcaacctctgcacaagcggaa
ttggcagatattgacaataatcctgaagatgaagattatggtggtgaggatagtcatttt
gataactttaattccactatgcaatttaatgaagaggagaatagatatgttcaaaagcct
ttacaaatccaaccattcgatcaatccaaaatggcaattaccaagagacctcgatttatt
caagaagtaccaactaagattgattataatcctataccgagattgagagagggtgctaag
atgtttactactggtaataataaagcaatgaaatatggacatggaatagcttttaagaag
gatctatcacctggtgtggaagtcaagaaactttcagctgctactataaatatatacagt
tacttctcaactgaaaatcaacatgaaaatatcatcaatggaatatggcattgtagtaat
tgtggtgtacctgaaatgtacgcgattggtagaaggaaaggaccaatgggtgataaaagt
ctttgtggtgaatgtggaaagtatttacacaagatgcgtaaaaacaaaccagtagtttac
aacaatgaccctgaataccataaaggtttgagagaacagatggagagggaaaatgaagaa
aggaatcaactccaaaaggcgaatgcacaacgttatagaaaggaaatgaaggcatcaagg
caagctcaaaaagttgcaaaagaggctgaacaacttgatttctatagtaattctcataaa
agaaaacaagatttggatttcagtgatgaagatgatacatttgaatacaagagaggcaag
aggaaatcgattgatgatgatgaagatgatgacgattacaatgaaggtgaagaagagaaa
ggcttaccacagacacgatcacagcgtcatagacaagtgcaattacctccacagccatca
cctactagtagccaatctgaagcatttggggatacatctaaaacgcgtcaatcacagtct
acgccaacttggttatcagaagcagccaagcaacttcgattgaaatatccaaacgatcag
tttattattgttgaaaagccatcacaagctggtgaagttcaagagtggagaataaaatgt
cttgattgtccaggaaagatgtacacacctggtcctggaatgacagttgaaaatttcgaa
aaacaccttaagaatcgccaacataagcaaaagttaatggctagattgggtataactgat
ggtttaagtccactgaatggaccaagtactagtttaagtccaatgagtcatccccatcag
caaggtttgaatcctttatcacgaccttcatctagtcatcaaacaccaatgcaagtcgct
atgtcacaagcacctagtcaacaaaccgatattcttgccgctgctatgcaacatgcttct
tctcaacatgatcagccagcaccgcaacaatcacaaggtccttcgcaattatataatcaa
gaacaatttatcaacattcctcacgatttaccaagtgatctgtcaaatgacttaccaggt
gatttaccaaattcgctcgatatttcaaacattgatatggatatgattggtcttccttca
tttgattttaatagtcaaaatgacgatcaaagtcaattctaa
DBGET
integrated database retrieval system
