Wallemia mellicola: WALSEDRAFT_59119
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Entry
WALSEDRAFT_59119 CDS
T03142
Name
(RefSeq) Rap30/74 interaction domain-containing protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
wse
Wallemia mellicola
Pathway
wse03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
WALSEDRAFT_59119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_59119
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
WALSEDRAFT_59119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
18473183
NCBI-ProteinID:
XP_006955976
JGI:
Walse1_59119
UniProt:
I4YJL0
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MRLNSNSSVDPANFSRPVKLNRKDPNHLLRPVPDIDPNTGKVKLDEQDRPILIDPQTNQV
IPPINDKNKRFFKRKTKQVFMADEDAMQLRRTERLPWILEDSDGSQKWHGQLDGKPSDQS
YIMLVFNENHGLDFKVQPTNRFYKFNQQPKYDTLSMEEADQAYSKGVDDVWFMRNRSRPV
ASTSNQSDPEIDNKQSIHQRLEGMMNQQPAQSRQANRRMQVDRGAVKEETFDGLFDEMEY
DEEFQDDDEQVIQDNQDDDELKELEDRIKKEMHQANIGHVEQTTNLDDFEEDIKPFKQKS
TSEKEMKKFLRRYDKSNADAYESDNSDDDDDEEEEERKKQEQDREQQRREREKKEQQDKD
QATNLAKSIKREQSPASLAAHEVARRATSPYAKQRSSSPSTKRSRTDLEDKPDNKKLKVK
RESSSPSATPPNSADGQVLQDDEIIAFLRGKSVTTNELIQHFKKRFKAQPKNRETIGGVL
KKVASRTPDGKLQLKEGL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaaattctaatagttccgtcgatcctgccaactttagtcgtcctgtcaagttg
aataggaaagatcctaatcatttacttagaccggtacctgatatcgatccaaacactgga
aaagttaagctagatgaacaggataggccaatcttgattgatccacaaactaatcaagtt
ataccaccaatcaatgacaaaaataaaagatttttcaagagaaagacaaagcaagtcttt
atggcagatgaggacgctatgcaacttagaagaactgaaagattgccttggattttggag
gatagtgatggttcacaaaagtggcatggtcagttagatggtaaaccatccgatcaaagt
tatattatgctcgtctttaatgagaatcatggtttagattttaaagttcagccgacaaac
cgtttttacaagtttaatcagcagccaaaatacgatactttatctatggaggaggcagat
caagcctattcaaaaggtgtcgatgatgtctggtttatgcgtaatcgatctagaccagtt
gcaagtacatctaaccaatctgatcccgaaattgataacaagcaatctattcatcaaaga
ttagaaggtatgatgaaccaacaacctgctcagtctagacaagcgaacaggcgcatgcag
gttgatagaggtgcagtaaaagaagaaacttttgatggtttattcgatgaaatggagtat
gatgaagaattccaagatgacgatgaacaagttatccaagataatcaggatgatgatgaa
ctcaaggagttagaggacagaataaagaaggaaatgcatcaagccaacatcggccatgtt
gaacaaacaacaaatcttgacgactttgaggaagatattaagccattcaagcaaaagagt
acctcagagaaagagatgaagaagttcttgcgtagatacgataaatctaacgcggacgcc
tatgaatctgacaattctgatgacgatgacgatgaggaagaagaagagcgtaaaaaacaa
gagcaagatcgtgagcagcaaagacgtgaacgtgagaagaaagaacaacaggataaggat
caagctaccaacttggccaaatcgataaagagggagcaatcacctgcatctctcgcagct
catgaagtagcaagacgggctactagtccttacgccaagcaacgctcatcaagtccatcc
acgaaacgtagcagaacagatttagaagataaacctgacaacaagaagctcaaggtgaag
agagagtcgtcttcaccttctgccacaccaccgaattctgcagatgggcaagtcttacaa
gatgatgaaattattgcattcttgcgcggtaaatctgttaccactaatgagctcatccaa
cacttcaaaaaacgcttcaaagctcagccaaagaacagagaaacaattggtggtgtgctc
aaaaaggtggcttccagaacaccagatggaaagttacaattgaaagagggtttataa
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