KEGG   Wallemia mellicola: WALSEDRAFT_59145
Entry
WALSEDRAFT_59145  CDS       T03142                                 
Name
(RefSeq) RPB5 subunit of DNA-directed RNA polymerase
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
wse  Wallemia mellicola
Pathway
wse03020  RNA polymerase
wse03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WALSEDRAFT_59145
  09124 Replication and repair
   03420 Nucleotide excision repair
    WALSEDRAFT_59145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wse03021]
    WALSEDRAFT_59145
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_59145
Transcription machinery [BR:wse03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     WALSEDRAFT_59145
  RNA polymerase III system
   RNA polymerase III
     WALSEDRAFT_59145
  RNA polymerase I system
   RNA polymerase I
     WALSEDRAFT_59145
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      WALSEDRAFT_59145
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 18473196
NCBI-ProteinID: XP_006956027
JGI: Walse1_59145
UniProt: I4YJR7
LinkDB
Position
Unknown
AA seq 207 aa
MEDEKLISKLWKVSRTAHEMVQDRGFAVSQQEIEIPYAEFKETYAGNGIIDRASLHFFAS
LEDNPDDQIFVFFADEPSIGIKTMRKFLTVLEERKIGRGILIYPEKLTPAANKVIAEMAA
DYKLQAFTESELQVNITHHQLVPQHEVLTAEEKKLLLQKYRLKPTQLPRILTSDPVARYF
GLERGQVVKIIRPSETSGRYASYRICF
NT seq 624 nt   +upstreamnt  +downstreamnt
atggaggacgagaagcttatctctaaattatggaaagtatcacgcacagcacatgagatg
gtacaagatagaggatttgcagtctctcaacaggagattgagattccatacgcagaattc
aaggaaacatacgctggaaatggtatcatagatcgtgcttcattgcacttcttcgcaagt
ctggaggataacccagacgatcagatattcgtcttctttgccgatgagccaagcatcggt
attaagacaatgagaaaattcttgactgttttggaggagaggaagataggcaggggtatc
ttgatctacccagagaagctcacgccagcggctaacaaggtcattgctgaaatggcggct
gactacaaattgcaagcatttactgaatcagagttgcaagttaacattacgcaccaccaa
ctcgttccccagcacgaagttctcacagcagaagagaagaagctccttttacaaaaatat
agactaaagccaacgcaattgccacgtatattgactagcgatcctgttgccagatacttt
ggattggaaagaggacaggttgtgaagattatcagaccttcagaaacatccggtcgttat
gcttcctacagaatttgcttctag

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