KEGG   Wallemia mellicola: WALSEDRAFT_59254
Entry
WALSEDRAFT_59254  CDS       T03142                                 
Name
(RefSeq) DEAD-domain-containing protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
wse  Wallemia mellicola
Pathway
wse03013  Nucleocytoplasmic transport
wse03015  mRNA surveillance pathway
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_59254
  09122 Translation
   03013 Nucleocytoplasmic transport
    WALSEDRAFT_59254
   03015 mRNA surveillance pathway
    WALSEDRAFT_59254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_59254
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_59254
   03009 Ribosome biogenesis [BR:wse03009]
    WALSEDRAFT_59254
   03012 Translation factors [BR:wse03012]
    WALSEDRAFT_59254
Enzymes [BR:wse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     WALSEDRAFT_59254
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     WALSEDRAFT_59254
   mRNA cycle factors
    Stress granule specific factors
     WALSEDRAFT_59254
Spliceosome [BR:wse03041]
 Complex C
  Other components
   EJC/TREX
    WALSEDRAFT_59254
Ribosome biogenesis [BR:wse03009]
 Eukaryotic type
  90S particles
   Helicases
    WALSEDRAFT_59254
Translation factors [BR:wse03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    WALSEDRAFT_59254
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 18473252
NCBI-ProteinID: XP_006956221
JGI: Walse1_59254
UniProt: I4YHV2
LinkDB
Position
Unknown
AA seq 394 aa
MDHERDEKLVFESSEEVQVASSFDKMGLKEDLIRGIYAYNFEKPSAIQQRAIVPITKGRD
VIAQSQSGTGKTGSFAISALQTIDTNIRDTQALVLSPTRELATQIQSVVLALGDYMSVQC
HACIGGTSVGEDIRKLDYGQHVVSGTPGRVYDMIRRRNLRTRNIKMLILDEADELLNLGF
KDQIYDIYRYLPPATQVVLFSATLPHDVLEMTTKFMTDPIRILVKRDEITLEGIKQFFVA
VEKEEWKFDTLCDLYDTLTITQAVIFCNTRKKVDWLTEKMREANFTVSSMHGEMPQKERD
GIMNEFRGGNSRVLITTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVA
INFVTVEDVRILRDIEQYYATQIDEMPLNLTEMV
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggatcacgaacgcgatgagaaattagtatttgagagcagcgaggaggtacaggtagcc
agcagctttgataaaatgggtttaaaggaagatttgattagaggtatttacgcatataac
tttgagaagccatcagctatccagcagagagctatcgtgccaattactaagggtagagat
gttatcgctcaatcgcaatctggtacaggtaaaactggaagctttgctatatcagcatta
caaaccatcgatacaaacatcagagatactcaagctttagtactgagtcctacacgtgaa
ttagccacacagattcaatcagttgtacttgctttgggtgattacatgtcagttcaatgt
cacgcttgtattggtggcaccagcgttggagaagacatccgcaaactcgattacggtcaa
cacgtcgtttctggtaccccaggaagagtatacgatatgattagacgtcgtaacctccgt
acgaggaacatcaaaatgcttatcctcgatgaagctgatgaacttcttaacttgggtttc
aaagaccaaatttatgatatctacagatatcttccaccagcaactcaagtcgttttattc
tctgccacattaccacacgatgttcttgaaatgacgacaaagtttatgacggatccaatt
agaatattagtaaaaagagatgaaattactttagaaggtatcaaacaattctttgtagct
gttgaaaaggaggaatggaaatttgacactctttgcgatctttatgatacgctaacgatc
acacaagctgttattttctgtaatactcgcaagaaagttgattggttaactgaaaagatg
cgtgaagctaactttacggtctcttcaatgcatggtgaaatgccacaaaaagaacgtgat
ggtattatgaacgaattccgtggtggtaactcaagggttttgattacaactgatgtttgg
gctagaggtattgatgttcaacaagtatcactcgttattaattacgatttaccaagtaat
cgtgagaactacattcatagaataggtagatcaggtagatttggtagaaaaggtgtagca
attaatttcgttactgttgaggatgtcagaattctcagagatattgaacagtattacgct
actcaaattgacgaaatgccattaaacttgacagaaatggtttga

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