Wallemia mellicola: WALSEDRAFT_59599
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Entry
WALSEDRAFT_59599 CDS
T03142
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_59599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_59599
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
WALSEDRAFT_59599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18473446
NCBI-ProteinID:
XP_006956790
JGI:
Walse1_59599
UniProt:
I4YHH1
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MNFDRRRINGPEATHELIYENSSHVKHLNERSTRKNDELRPVFIKPGLISSASGSTYIEC
GNTKIACAVYGPKQIKNAPYSSTGKLNVEIKHAPFSSSIRRDPVKELEATHLSSQVTQAL
LPSLRLENYEKMQIDLFVTIIQDDSLDFGLLANITTAAGTALASSGLEMNGLVVGATVAF
KEDEMLLDPSPSEVKYAKAVMTVCTLPALTQIAHIWQAGTLDINQYKQALQITESASRNI
HTLIAKTLMNETNA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgataggaggaggataaacggtccagaagcgacacatgaacttatatatgag
aatagcagtcatgttaagcacctgaatgagcgttcaactcgcaagaatgacgaattgaga
ccagtttttataaaaccgggcttgatctcttcagcttcaggatcgacttatatcgagtgc
ggaaatacgaagatcgcctgtgcagtttacggtcctaaacagataaagaacgcaccatac
tcatcgactggaaaattaaacgtagagataaaacatgcacccttcagttcaagtatacga
cgtgatcctgttaaggaattagaagcaacacacctcagcagtcaggttactcaagcactc
ttaccaagcttgagactggaaaattacgagaagatgcaaatagacctattcgttacgatc
atacaggatgattctcttgatttcggtttacttgctaatataacaacagctgcaggtacg
gcactcgccagctctggattagaaatgaacggtttggtagttggcgcaacagttgcgttt
aaggaggacgagatgctacttgatccatcaccttcagaagttaaatacgcaaaagctgtc
atgactgtctgtacacttcccgcccttactcaaatagcccacatttggcaagctggtaca
cttgatattaatcaatataagcaggcgttgcagattacagaaagtgcttcacgaaatatc
cacacgctgatagcaaagacattgatgaatgagacaaatgcatag
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