Wallemia mellicola: WALSEDRAFT_59721
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Entry
WALSEDRAFT_59721 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
wse
Wallemia mellicola
Pathway
wse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
WALSEDRAFT_59721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_59721
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
WALSEDRAFT_59721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
18473515
NCBI-ProteinID:
XP_006957037
JGI:
Walse1_59721
UniProt:
I4YGA6
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MDSPNTSKTVDFRPQRNSLGRSASQVATTKPNITTEYIPQERPSITTPKETPQPVTQVDN
TTAITSTANVAGTATTQSVDAPERALAPTEAQKGDANDFFLKRAQAMAEDPAKDIISPST
APSLDIDPATLDAAAVYDIDINAIDSEKPWRQPGADLTDWFNYGFDEYKWLDYASRKKNL
GSTVEKINPFAAHNSTPDELLNVLPPELQAMMNMMPPMPQVGAMQMPGMPMPGMPPGMPP
GPMPGMPGMPGMPGMPPGFDMSMMMGGVPPIGMMNQSSDPNEVKEEDYGDPKPDNGKYRS
KTKHYNDKDKIGAQDSALDYGDDPSPDNDDDSRLTSMKDDDRDYKDKSFKDKKDYEKDYD
RRGSPVSNASSRYGSRNDRDSSYRERERESEDKAREREKDRKTDRDSRRSHNRSRSPPSR
HSKDRDRDRYDYKDRRDRDYRDRERERDRDRYDSRRSGRTSSRS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccaatacttcaaaaactgtcgactttagacctcagaggaattccctaggt
agatctgctagtcaggttgcaaccaccaaaccgaacatcactacagagtatataccacag
gagagaccttctattacaacaccaaaagagacaccacaaccagtcactcaagtcgataat
acaaccgctatcacctcaactgccaacgtcgcaggtacagctacaacccagtccgtagac
gccccagaacgcgcattagcaccaacagaagcacaaaaaggcgacgccaatgacttcttc
cttaagcgtgcccaagcaatggcagaagacccagcaaaagatatcatttcaccatctact
gcaccttctttagatattgatcctgccacattagacgctgcagctgtatacgatatagat
attaatgctattgatagcgagaaaccatggagacagccaggcgctgatttaactgattgg
tttaactatggctttgatgaatataagtggcttgattatgcttcgcgaaagaagaacctt
ggtagtacagtggagaagataaatccatttgccgcacataactcgacaccagatgaatta
ttgaacgtgctcccaccagaactccaagcaatgatgaatatgatgccaccaatgccacaa
gtgggtgctatgcagatgccaggtatgcctatgccgggtatgccacctgggatgccacct
ggtccgatgcccggtatgccaggaatgccaggtatgcctgggatgccaccaggatttgac
atgtccatgatgatgggtggtgtaccacctataggtatgatgaatcaatcttccgaccca
aatgaagtgaaagaagaagactacggcgatcctaaaccagataatggtaaatacagaagt
aaaacaaagcactataatgataaagataaaattggtgcacaagattcagccttagattat
ggagatgatccttcaccagataatgatgatgacagtagactaaccagcatgaaagatgat
gatagagattataaagataaatccttcaaagataaaaaagactatgagaaggactacgat
cgtcgggggtcaccagtttcaaatgcgtcatcccggtatggcagtagaaacgaccgtgat
agtagttatagagaacgtgagagagaatctgaagataaagcaagagagcgtgaaaaagat
agaaaaactgacagagattctagaagatcacacaacagatcgcgttcaccgccatctcga
cacagtaaagatcgtgatagagataggtacgactataaagataggagagatcgcgactac
agggatcgtgagagggagagagaccgagaccgctacgactctcggaggtctggtagaacc
tcttcaagaagttaa
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