KEGG   Wallemia mellicola: WALSEDRAFT_59875
Entry
WALSEDRAFT_59875  CDS       T03142                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
wse  Wallemia mellicola
Pathway
wse03013  Nucleocytoplasmic transport
wse03015  mRNA surveillance pathway
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_59875
  09122 Translation
   03013 Nucleocytoplasmic transport
    WALSEDRAFT_59875
   03015 mRNA surveillance pathway
    WALSEDRAFT_59875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_59875
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_59875
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     WALSEDRAFT_59875
    TREX complex
     WALSEDRAFT_59875
Spliceosome [BR:wse03041]
 Complex C
  Other components
   EJC/TREX
    WALSEDRAFT_59875
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    WALSEDRAFT_59875
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_8 DUF5659 RRM_11
Other DBs
NCBI-GeneID: 18473600
NCBI-ProteinID: XP_006957325
JGI: Walse1_59875
UniProt: I4YFB8
LinkDB
Position
Unknown
AA seq 237 aa
MSLDDIVKKKKTSGAGFKRRGSAKPRGGFRKQHGHSKPAEYRSSTSFSKRPTTNRPREPR
QPPAGERENQIKMTNVHYEISEEMLGNIFNGYQVTKLRIRYDKSGRSTGEAIVAFESSED
ADRAIEEFNGKTAKDQIINVEPYGYFTVDPPSHAGASSGDNAGSLLSRLGSKVNPGPVPT
GPRAQISRRSVKQSKPKKAGFNKPKPAPKDADSLDKELDEFMKKPTENDNTEDTEMS
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagtttagacgatatcgtcaagaaaaagaaaacttctggagctggcttcaaacgtcgt
ggttcagctaaacctcgcggtggattcagaaagcagcacggacattccaaaccagctgaa
taccgctcttctacttcattctctaaaagacctacaacgaatagaccacgagaaccacgc
cagccaccagctggagaaagggagaatcaaattaagatgacaaacgttcattacgaaatc
agtgaagaaatgcttggtaatatattcaacggttatcaagtcacaaagttgcgtattagg
tatgataagagtggtagaagtaccggagaagctatcgtcgcctttgagagttcagaagac
gcagatagagcgattgaagagttcaatggcaagacagctaaggatcagattattaacgta
gagccatatggatacttcactgttgacccaccttcacatgctggtgcttcaagtggagac
aatgcaggttcattgttaagtagattaggtagtaaagtaaatccagggcctgttccaact
ggaccaagagctcagatatcaaggcgttcagttaagcaatccaagccaaagaaagcaggt
tttaataaaccaaagccagctcctaaagatgcagattccctggacaaagaattagatgaa
tttatgaagaaaccaacagagaatgataatacagaagatacagaaatgtcataa

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