Wallemia mellicola: WALSEDRAFT_60067
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Entry
WALSEDRAFT_60067 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
wse
Wallemia mellicola
Pathway
wse03020
RNA polymerase
wse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WALSEDRAFT_60067
09124 Replication and repair
03420 Nucleotide excision repair
WALSEDRAFT_60067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_60067
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_60067
03400 DNA repair and recombination proteins [BR:
wse03400
]
WALSEDRAFT_60067
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
WALSEDRAFT_60067
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
WALSEDRAFT_60067
DNA repair and recombination proteins [BR:
wse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
WALSEDRAFT_60067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
18473719
NCBI-ProteinID:
XP_006957673
JGI:
Walse1_60067
UniProt:
I4YEN7
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MFFVKHDLTHRLHLHPSYFGPQTMDFINNKLYADVEGTCTGRYGYIIAVLSISDPGSGTV
LPGVGTAEFVVKYTAIVYKPFKGEVVDGQVASVNKMGFFADVGPLQVFVSSHLIPQDIKF
DPSSNPACFSSEDQVIEKGSKVRLKIVGTRVDATEIFAIGTIKEDYLGVLD
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgttaaacatgatctcacgcatagattgcatctacatcccagttatttcggt
ccacagacgatggatttcatcaacaacaagttgtacgctgacgtagaaggtacctgcaca
ggtagatatggttacattatagcagttctatcaatttcagatcctggctccggaactgta
ctccctggtgttggtactgctgaattcgttgttaaatataccgcgatagtttacaagcca
ttcaaaggtgaagtagtcgatggacaggtggcttctgtaaataaaatgggattctttgca
gatgttggaccactccaggtcttcgtatcaagtcacctcattccacaagatatcaaattc
gatccgagttcaaatccagcctgctttagctcagaggatcaagttatcgagaaaggctca
aaagtcaggctgaaaatcgttggtacgagagtcgatgcgacggaaatttttgctattggt
actataaaggaagattatctgggtgttctcgactga
DBGET
integrated database retrieval system
