Wallemia mellicola: WALSEDRAFT_60304
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Entry
WALSEDRAFT_60304 CDS
T03142
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_60304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_60304
03012 Translation factors [BR:
wse03012
]
WALSEDRAFT_60304
Enzymes [BR:
wse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WALSEDRAFT_60304
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
WALSEDRAFT_60304
Translation factors [BR:
wse03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
WALSEDRAFT_60304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
DEAD
HA2_N
OB_NTP_bind
AAA_19
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18473874
NCBI-ProteinID:
XP_006958217
JGI:
Walse1_60304
UniProt:
I4YD83
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSKDLEFYNTNQQFDKIRQQRGSLPIFTQAEEVVTSINDNMITVLMAATGSGKTTQMPQL
ILDDAIQHGRGAKCNILCTQPRRIAAISVAQRVASERGEKLGKRVGYQVRFESKKPEPHG
SITFCTTGVFLRRMQSALEESAGDSTEGKDKYGMLDDITHVVVDEVHERDVDTDLTLVVL
KRLIADRKARGKPLKVILMSATIDSDLFQNYFASVNNDVPAPVADIPGRSFPVTKYFLDD
YLEEMKTLPEKEGGWVFKEKNVMEYMKNEFKDEMGGDELEIPYPLVALTIAHVARLSRNE
DGHILIFLPGWDEIKAVQTILEEQKLYGVDFNDRGKYSIHVLHSSVPVQEQQKIFEPCEE
GIRRIILSTNVAETSVTIPDVVYVVDAARVKEKRYDAEKHMSQLVSAWVGKSNLNQRAGR
AGRHREGEYYGVLSKRRYESLAAHQTVEMKRVDLSEVVLRVKALNFPGLEVEDVLAQAIE
PPAPERVKLALDRLYLIGAINKKKELTSLGKVLLQLPIEAPIGKLILYATFFRCLDPALS
LAAILTNRDPFVAPLDLRAEANAAKQKWSQREYKSDPFTILNAYETWWGLHSAGKHSQAW
DFVNENFLSRATLLQIRQVKEHLYKSLESLKLTEFLTSDPALNKAKVGSQDKAKNLRKGE
LVIPDYLNVNAHSKPMLAALIAMSCSPNFALRTGDRNHRTAAEKSVFIHSSSVLHPRNEK
DEVSYSKQLQYVNKHIVSFQEKTKNVSNLSAGPPGREPQVMLRMCTKLDLMVYALFGAAE
IKQDGDQVIIDDWVVLFGQKKELESLRKLKMMLHSCMLRVFEGVHAGSALEQAEMYNDEE
IYKLDNLLVLQSEEEAEQVNEEKLSPKEQVELDLMANNVVFLLNQWAKDANDYEDKVFGR
KQINVTKKGNGAVNKKYASNPSSGTTTPNNQVKAILKRPASQTGSNSSAYGSNQSIHASK
NTSLQSSRTNSAFPSRSNSSQNLTNSRSKNDKGMESSRWR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagatttagaattctacaacacaaatcaacaatttgacaagatacgtcaacaa
agaggctcacttccgatatttacacaagcggaggaagttgtaactagtataaatgacaac
atgatcacagtccttatggctgctactggttcaggtaagaccacacaaatgccacagttg
atattagacgatgctatacaacatggtagaggtgcaaaatgcaacattctttgcacccag
cctagacgtatcgcagccatttctgttgcacaaagagttgcatctgaaaggggtgagaag
ttaggcaaaagagttggttatcaagttaggttcgaatcaaagaaaccagaacctcatgga
tcaattacattttgtacgactggtgtctttttgagacgcatgcaatcagctttagaagag
agcgcaggagatagcactgaaggaaaagataaatatggtatgttggacgatatcactcat
gttgttgtcgatgaagtacacgagagagatgtagatactgatctcactttggtcgtcctc
aagcgtttaatagcagatagaaaagcaagaggtaaaccactgaaagtcattttaatgtct
gcaacaatcgactcagatttattccaaaattacttcgcttcagttaataatgacgtacct
gcaccagtagctgatataccaggtagatcatttccagtgactaagtactttttggatgat
tacctggaagaaatgaaaactctaccagagaaagaaggtggatgggtatttaaagagaag
aacgtaatggagtatatgaagaatgaattcaaagatgaaatgggtggtgatgaattggaa
ataccctatccacttgttgcactcactatagcccatgttgcaaggttgtctaggaatgag
gatggtcatatacttattttcttgccaggatgggatgaaattaaagcagttcagactatt
ctcgaagaacaaaagctttatggtgttgacttcaacgatcgtggtaaatactcaattcat
gttttacattcatccgtaccagtacaagaacaacagaagatttttgaaccttgcgaagaa
ggaatcaggagaattattctttctacaaatgttgctgagacttcggttacgattcctgat
gtcgtatacgtcgttgatgctgctagagttaaagaaaaaagatatgacgctgaaaagcat
atgagtcaactggtttcagcatgggtaggtaaatccaaccttaatcaacgtgccggtaga
gcgggtagacaccgtgaaggtgaatactatggtgttttatctaaacgtcgctacgaatca
ctggctgcacatcaaacagttgaaatgaagagagtggatttaagtgaagttgtattgcgc
gtaaaagcactaaatttccctggtctggaagtcgaagatgttttggctcaggcgatcgag
ccacctgcgcctgaaagggttaaattagctttagataggctttacctgattggtgctatc
aacaagaagaaggaattgacatccctcggtaaggttttattgcaattaccaatagaggcc
ccaattggaaagttgatcttatatgctacattcttcaggtgtttagatccagcactcagt
ttagcagctatactcacaaatagagacccattcgttgctccacttgatctccgcgctgag
gccaacgctgcgaaacaaaaatggtctcaaagggaatacaagagtgatccatttacaatc
ctcaacgcatatgaaacttggtggggactccatagtgctggtaagcactcccaagcctgg
gatttcgtcaatgagaatttcctatcacgtgcaacgttgttacagattagacaagttaaa
gaacacctctataaatcgctggagagtctcaaattgactgagttccttacctctgatcca
gcactcaacaaggccaaagtagggagccaagataaggcaaagaacttgagaaagggtgaa
ttagttattccagattatcttaacgtcaatgcgcattcgaaacccatgttagctgcactt
atcgctatgtcttgctcaccaaacttcgcattgaggacgggtgaccgtaaccatcgtaca
gctgctgaaaagagtgttttcattcatagttcttcggttcttcatccaagaaatgaaaag
gatgaggttagctatagcaagcagttacaatatgtcaacaagcatattgtttcattccaa
gagaaaacgaagaacgtttcaaatctttcggctggtccaccaggaagagaaccccaagtt
atgctgagaatgtgcaccaagttggacctcatggtgtatgctctctttggtgctgctgaa
ataaaacaggatggcgaccaagttatcattgatgattgggtggtgttgtttggacaaaag
aaagaacttgaatctttgcgcaaactcaaaatgatgttacactcatgtatgttgagagta
tttgaaggtgtacacgccggtagtgctctcgagcaagcagagatgtacaatgatgaggag
atttacaaacttgacaatttactcgttttacaatctgaagaggaagctgaacaggtaaac
gaagagaagttgtcgccaaaggagcaagttgaattggatttgatggccaataatgttgtc
tttttgctcaaccagtgggctaaagatgcaaatgactatgaagataaggtttttggaagg
aagcagatcaatgttacgaagaaaggcaatggtgctgtgaataagaagtatgctagcaac
ccaagcagtggtacaacgacaccaaataatcaagtcaaagctatactaaagagaccagca
agtcagactggtagcaatagcagcgcttatggaagtaatcaaagcatccatgctagtaaa
aacacgagcttacaatcatctcgaacaaatagcgcgttcccaagtagaagtaacagcagc
caaaatttgacgaacagcagaagtaaaaatgacaaaggaatggaatcatctaggtggaga
taa
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